Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2560 ATGGCAGAGACGCAAGTGAAAGCAGAAACATCTGTTTCATCTTCAGCTCCGGTTGTAGTTGAGGTACCATCAAACGATGCTTCTGAAACGGCTAAGGCTGCTGAGGAATCTAAAGAAACACCAGAGACACCAGTTCCTGCAAACAAACTAAGCTCAAAAGGAGGATCTCTAGATAGAGATATTGCTTTAGCAGAACTTTCCAAAGAGAAAAAGTTATCCTATGTGAAAGCATGGGAAGAGAGTAAAAAAACCAAAGCAGATAACAAAGCTCATAAATACATCTCTTCCATTGCTTCTTGGGAAAACAGCAAGAAGGCTGCTCTCGAAGCCGAGCTCAAAAAGATCGAGGAAAAACTAGAGAAAAAGAAAGCACACTATGGTGAAATAATGAAAAACAAGATAGCAGTAATTCACAGGGAAGCACAAGAGAAAAGAGCAGTAATTGAAGCCAAACGAGGCGAGGAAGTTCTTAAGGTCGAGGAAATGGCTGCAAAATACCGTGCAACCGGAACTACTCCGAAGAAAATAGTTGGCTGCTTTTGA 543 0.4144 MAETQVKAETSVSSSAPVVVEVPSNDASETAKAAEESKETPETPVPANKLSSKGGSLDRDIALAELSKEKKLSYVKAWEESKKTKADNKAHKYISSIASWENSKKAALEAELKKIEEKLEKKKAHYGEIMKNKIAVIHREAQEKRAVIEAKRGEEVLKVEEMAAKYRATGTTPKKIVGCF* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2560 180 Coils Coil 98 132 - -
Psa3g2560 180 MobiDBLite consensus disorder prediction 1 56 - -
Psa3g2560 180 PANTHER OS02G0117200 PROTEIN 1 180 - -
Psa3g2560 180 Pfam Remorin, C-terminal region 70 175 IPR005516 -
Psa3g2560 180 MobiDBLite consensus disorder prediction 1 21 - -
Psa3g2560 180 PANTHER CARBOXY-TERMINAL REGION REMORIN 1 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g2560 Psa-Chr3 215795708 215796954 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g2560 - - gmx:100305679 219.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g2560 3 215795708 215796954 Psa6g4559 6 397146213 397147888 ECH
Psa3g2560 3 215795708 215796954 Psa3g2560 3 215795708 215796954 ECH
Psa4g4657 4 412914841 412917703 Psa3g2560 3 215795708 215796954 ECH
Psa2g4151 2 421367883 421369248 Psa3g2560 3 215795708 215796954 ECH
Psa7g0800 7 58262821 58264432 Psa3g2560 3 215795708 215796954 ECH