Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g3892 ATGGCGGCCGGTCCTACATCAACAACCGCTCCAACAACCGTTCCTCTTCAACCACCACCGCCAATGCTCGTCTCTGATTCATTTGCCAAAGACGCTATTCTCGCTTGGTTTCACGGCGAGTTTGCTGCTGCCAACGCGATTATCGATGCTCTCTGTTCTCATCTCTCTCACCTTTCCTCTGCCGCGGATTACAGCTCTGTTTTCGCGGCTATTCACCGTCGGAGACTCCATTGGATCCAAATCCTTCAGATGCAGAAGTATCACTCCATTGCTGATGTCGCTCTTCAGCTTAAAATTGTCGCGGAGAAGAAAAATACCGTTGAGGAGGTGGTTAATGAAAACGACGTCGTCGCGGAGGAGGAGGAACGGAAAACAGAGGAGAAAGTTATCGACGGTGGTAATGAACACGAAGAGTATGATTCTCCTGAGAGTGAGATTACTGATTCAGGGTCTCTAGAAAATCAAACTAGTTCGATGAACAGTGATATATGTTCCAATCATGAAGAGTGTGAAGGACGTGCTTCACAGTTTAAATTGACAAAAGGTTTCTCAGCAAAGGAGTCAGTGAAGGGGCATATGGTGAATGTTGTGAAAGGGTTGAAGTTATATGAAGACGTTTTCACTGATTCAGAATTGTGCAAGCTGTCAGATTTTGTGGATGAGATCCATACTGCTGGTCAGAACGGAGAACTGTCTGGTGAAACTTTTATACTATTCAACAAACAGATAAAAGGTAACAAGAGAGAGCTGATTCAGCTGGGTGTTCCAATATTTGGACAGATAAAGGAAGACACAAAAAATAATATAGAGCCAATTCCAGCACTTCTGCAACGTGTCATTGATCACTTTATTCAATGGCACTTACTTCCAGAGTACAAAAGACCAAATGGTTGTATCATCAACTTTTTTGAAGAGGGGGAGTATTCTCAGCCATTCCTGAAACCACCACATCTGGATCAACCTGTGACCACTCTTCTTCTCTCTGAATCAACCATGGCTTTTGGGCGTATCCTTATGAGTGAAAATGACGGGAACTACAAGGGACCACTCATGCTCTCACTGAAGAAGGGGTACATATCAAAGAACTTATTCTCTTTGCAGTCCTAA 1107 0.439 MAAGPTSTTAPTTVPLQPPPPMLVSDSFAKDAILAWFHGEFAAANAIIDALCSHLSHLSSAADYSSVFAAIHRRRLHWIQILQMQKYHSIADVALQLKIVAEKKNTVEEVVNENDVVAEEEERKTEEKVIDGGNEHEEYDSPESEITDSGSLENQTSSMNSDICSNHEECEGRASQFKLTKGFSAKESVKGHMVNVVKGLKLYEDVFTDSELCKLSDFVDEIHTAGQNGELSGETFILFNKQIKGNKRELIQLGVPIFGQIKEDTKNNIEPIPALLQRVIDHFIQWHLLPEYKRPNGCIINFFEEGEYSQPFLKPPHLDQPVTTLLLSESTMAFGRILMSENDGNYKGPLMLSLKKGYISKNLFSLQS* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g3892 368 MobiDBLite consensus disorder prediction 117 153 - -
Psa6g3892 368 Gene3D - 183 359 IPR037151 -
Psa6g3892 368 PANTHER 2OG-FE(II) OXYGENASE FAMILY OXIDOREDUCTASE 9 358 - -
Psa6g3892 368 MobiDBLite consensus disorder prediction 117 140 - -
Psa6g3892 368 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 9 358 IPR044842 GO:0003729|GO:0006402|GO:0032451
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g3892 Psa-Chr6 339248982 339254821 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g3892 K10767 - gmx:100802371 525.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g3892 6 339248982 339254821 Psa6g3892 6 339248982 339254821 ECH
Psa3g1542 3 139623046 139630417 Psa6g3892 6 339248982 339254821 PCT