LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Psa6g3891	ATGAATTTCTTCAAATCCGTTTTCTCCGATGATCCAGATCCTCCTCAACCCGAACCCAACGATTCAGATCCCAATCCCGATTCCGGCGCCGACGACGCTTGGAACTTTGGTGGACTTATCAAAACCCTCACATCCAAATCCGAATCCATAATCGAGACTTATCGTCGTGATCTACAGGAATTCAGCACCGGCTTGAAGAGCGAGATCGAAGTTGCTCAAGATTCGGTTGGCGAGATCGGTAGCACCGTCATTAAATCAACTGCTCAGATCATATCTCAAGGTAAGGAAGCCATCCTTGCCGTTAACCTCGATTCAGATTCTGATAATGGTACCACCACGGCGAGTCGCGATTCGAGCCGATTGGATTCGAAGCGATATAGTAGGTTTGATGCCCAGGTTGGTGCTATTCAGGGGGATGTTAGCACTTACACTGAGGTGCCTGAGGATTTGAACGAATTCAATGAGTGGAAATTAGGGTTTGCACTGGATGGGAAAAGTGATGAAATGGAGAGTCTTTTTAGAGAGAATGATGCAATGGAGAGTGTTTATAAAAAGGTTGTTCCAAATGCTGTTGATCATGAAACTTTCTGGTATAGGTATTATTATAAGGTTTATAGACTCAAGAAAGCTGAAGATGTTAGGGCTAGGCTTGTTGGAAGAATATCCAGGGAAGAAGAGGATTTGAGTTGGGATGTTGAAGATGATGAGGAGGAGAATGAAGGTGAAGTTAAACCAGAGATTGTGATCAATAAGGAAATTGGTGGTGAAAATTTGGGGAAAAGTGTAGATACTGATTTGAAAATTGGTACATCTAGCTCTGGTGCTAGTGATGAGAAGAGATTGAGTGTGGAAGTAGAAAAGAGAGACAATTCAATGCAAAGCAATGAACATGGTAATGAGATGGTTAAGTCTGTTGAAGAATCACCTGTTGTTGAGAAAGCTGAAGTTGTTCATGAGATGGGTGGTGGAAGTGAGGAAAAGAATGAGGATGGCGGCGTTGATAAAGCATCAAATTTGGAAATGGGCGATGATGCTGCAAATAAGGATGGTTCAGCGGCTGCGTCCAATGAGAAAGTGGTAATACTGGAAACGAAGGCTTCTGATGTAAAATCTCCGGGTAAGAATAATGAGTCATCAGTGGTTGAGAGTCAGCCCATGGAAAATGAGGAGGAAGAGGATCTTGGGTGGGATGATATAGAGGATCTTAGCAGTATTGATGATAAGAAAGCAGCTCAATCTGAGAGTCAGGGTGGTAGCACCAGCAAGGTTGATTTGCTGAAGCGCCTTAGTACTGCAGAGGAAGATGAAGACTTGAGTTGGGACATTGAGGATGATGACGACGATGAGCCTGTTAAGCCTTGA	1362	0.4361	MNFFKSVFSDDPDPPQPEPNDSDPNPDSGADDAWNFGGLIKTLTSKSESIIETYRRDLQEFSTGLKSEIEVAQDSVGEIGSTVIKSTAQIISQGKEAILAVNLDSDSDNGTTTASRDSSRLDSKRYSRFDAQVGAIQGDVSTYTEVPEDLNEFNEWKLGFALDGKSDEMESLFRENDAMESVYKKVVPNAVDHETFWYRYYYKVYRLKKAEDVRARLVGRISREEEDLSWDVEDDEEENEGEVKPEIVINKEIGGENLGKSVDTDLKIGTSSSGASDEKRLSVEVEKRDNSMQSNEHGNEMVKSVEESPVVEKAEVVHEMGGGSEEKNEDGGVDKASNLEMGDDAANKDGSAAASNEKVVILETKASDVKSPGKNNESSVVESQPMENEEEEDLGWDDIEDLSSIDDKKAAQSESQGGSTSKVDLLKRLSTAEEDEDLSWDIEDDDDDEPVKP*	454

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Psa6g3891	453	MobiDBLite	consensus disorder prediction	436	453	-	-
	Psa6g3891	453	Pfam	BSD domain	156	212	IPR005607	-
	Psa6g3891	453	SUPERFAMILY	BSD domain-like	126	213	IPR035925	-
	Psa6g3891	453	SMART	wurzfinal6	156	208	IPR005607	-
	Psa6g3891	453	PANTHER	PROTEIN, PUTATIVE-RELATED	74	446	-	-
	Psa6g3891	453	PANTHER	PROTEIN, PUTATIVE-RELATED	1	73	-	-
	Psa6g3891	453	Coils	Coil	207	227	-	-
	Psa6g3891	453	Gene3D	BSD domain	117	217	IPR035925	-
	Psa6g3891	453	MobiDBLite	consensus disorder prediction	262	453	-	-
	Psa6g3891	453	ProSiteProfiles	BSD domain profile.	156	208	IPR005607	-
	Psa6g3891	453	PANTHER	SYNAPSE-ASSOCIATED PROTEIN	1	73	-	-
	Psa6g3891	453	PANTHER	SYNAPSE-ASSOCIATED PROTEIN	74	446	-	-
	Psa6g3891	453	MobiDBLite	consensus disorder prediction	384	400	-	-
	Psa6g3891	453	MobiDBLite	consensus disorder prediction	279	337	-	-
	Psa6g3891	453	MobiDBLite	consensus disorder prediction	369	383	-	-
	Psa6g3891	453	MobiDBLite	consensus disorder prediction	264	278	-	-
	Psa6g3891	453	MobiDBLite	consensus disorder prediction	1	34	-	-
	Psa6g3891	453	MobiDBLite	consensus disorder prediction	409	426	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Psa6g3891	Psa-Chr6	339246343	339248752	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Psa6g3891	-		-	lang:109354531	427.172

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Psa6g3891	6	339246343	339248752	Psa6g3891	6	339246343	339248752	ECH
	Psa3g1543	3	139628449	139629732	Psa6g3891	6	339246343	339248752	PCT