Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g3843 ATGAGTGAAATTACTACGAAGAATCAACCGTCAAAGACACACTGGTGGTGGCTTGATGAGCACACCGCGGTTAGAAGATCACCATGGCTTCAATCTACACTCACTGAGCTGAATGAGAAGACAAAGGCAATGTTAAAGTTAATTGAAGAAGATGCAGATTCCTTTGCTCAACGAGCTGAGATGTTTTACAAGAAGAGACCGGAGCTTGTGAGCATGGTTGAAGATTTCTACAAGATTCACCGCTTGTTAGCTGAGCGGTATGATCAAGTTCGGCCTGAAGCTGGAATTCGCCTACTCCCTCCTTCTGCTCGCTTGATGCATTCTCAATCAGAGAAGTTGATGAGTTTTGATTATCGTGGTTATGATAGCTATTCTGAGAATTGTGACGTGGAGGAATCTGTGGAATCGGAAATTGATGATCCTGAGCATGAAGGGGAAGTTCGGTCTGCGGCTCCAAATGAAGTGACAAAGTTGTTGAAAGACATTGAAAGAGTAGGTGAAGTGAAGAAGACTGATAAGGATCAAATCAAGCAGAAAGATGAGATTCTTGATGAAGTAATGATGTTGAGGGAAGAAATCGAACGACTCAGAAAAGAAAAAGATGAACTCGCGCAGAAAGATATCATTTTTAATGATGTAGTATTGAATTTGAGGGAAGAAATAGAACAACTCAAAAAGGATAATAAAACAACGAAGAATGAAGTTCGTCAAAAAAATATCATCCGCGGCGAAGTAATGAAGTTAAAGGAAGAAATAGAGCGACTCAGAAAAGAGAATGAAGCTCAAAAGGAAGAAATCAAGAAGAAAGATAGCATTTCCAATGAAGTAATGAAATTGAGGACAGAGTTAGAAAGATGCAAGAAAGAGAATAAAGCTCAAAACGATGAACTCAAGAAGAAAGATAGCATTTCCAATGAAGTGATGAAATTGAGGAAAGAATTAGAGAGACGCAAGAAAGAGAATAAAGCTCAAAACGATGAACTCAAACATAAAGACACCATTCGCGATGAAATAACGATGTTGAAGGAAGAGAGGGAAAGTTTTAGAGAAGAGAATAAGACACAGAAAAACGATCTCAAGCGGAAAGACCAAGAGAAGATAGAGGTGATAAGACAACTAAGTTCAACAATAGATTTGCTGAAGCAAGAGAATGTAAAGCTGAAAAGCTTCATCGCCAAGGAATCCGCCAAGAAATGGAAGACACCATTCGAGTTGGATAAACTAATCGAAACATTTTCAGGCAAGTTGTTTAAGGGAGGTCCTAGGAGAATTAAGCCAAGTGTTGTAGCTCTCTAG 1296 0.3912 MSEITTKNQPSKTHWWWLDEHTAVRRSPWLQSTLTELNEKTKAMLKLIEEDADSFAQRAEMFYKKRPELVSMVEDFYKIHRLLAERYDQVRPEAGIRLLPPSARLMHSQSEKLMSFDYRGYDSYSENCDVEESVESEIDDPEHEGEVRSAAPNEVTKLLKDIERVGEVKKTDKDQIKQKDEILDEVMMLREEIERLRKEKDELAQKDIIFNDVVLNLREEIEQLKKDNKTTKNEVRQKNIIRGEVMKLKEEIERLRKENEAQKEEIKKKDSISNEVMKLRTELERCKKENKAQNDELKKKDSISNEVMKLRKELERRKKENKAQNDELKHKDTIRDEITMLKEERESFREENKTQKNDLKRKDQEKIEVIRQLSSTIDLLKQENVKLKSFIAKESAKKWKTPFELDKLIETFSGKLFKGGPRRIKPSVVAL* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g3843 431 Coils Coil 179 206 - -
Psa6g3843 431 MobiDBLite consensus disorder prediction 314 333 - -
Psa6g3843 431 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 13 94 IPR011684 GO:0003779
Psa6g3843 431 PANTHER PROTEIN NETWORKED 3A-RELATED 13 299 - -
Psa6g3843 431 PANTHER PROTEIN NETWORKED 3A-RELATED 284 431 - -
Psa6g3843 431 PANTHER PROTEIN NETWORKED 4A 13 299 - -
Psa6g3843 431 PANTHER PROTEIN NETWORKED 4A 284 431 - -
Psa6g3843 431 Coils Coil 214 365 - -
Psa6g3843 431 Pfam KIP1-like protein 15 88 IPR011684 GO:0003779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g3843 Psa-Chr6 334538550 334543931 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g3843 - - cam:101504474 447.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g3843 6 334538550 334543931 Psa6g3843 6 334538550 334543931 ECH
Psa3g0580 3 52667436 52670303 Psa6g3843 6 334538550 334543931 PCT