Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0580 ATGAAGGAGAAAATGGCTGGAATGAACAAGAATCAACAATCAAATTGGTGGTGGCTTGATACTCATTCTAATACTAAACGTTCCCCTTGGCTTCAATCCACTCTATCTGAGCTAAATGAGAAGACAGATGCAATGTTAAAGTTAATTGAAGAAGATGCGGATTCCTTTGCTAAACGAGCAGAGATGTATTACAAGAAACGACCAGACCTTATAAGTATGGTTGAGGATTTCTATCGGACACACCGCTCGTTAGCTGAGAGGTATGATCAAGTCAAACCCGACACAGGAATCAGCCACCTCGTGTCGGGAGCATCACCTTTTGCTTCGGCTAAGTATCAGATAGAGAAACTGATGAGTTTTGCAGATACCGGTTATGATACCTATTCTGAGAATTTCGACGTAGACGAGTCTGTGGAATCTGAAGTTGATGATCCAGAGCATGAAGAAAAAGAGGAGACCAAATTTCATAGTTACACAAAAGCAGAGCGGGTTTGGTCGACCGTGGCTGTCAATGACGAAGTAATGAATCTAAAAAATGAGATTAAGAGAATAAAGGAAGAGAATGAGATACATAAGGAGCAGTTGAAACAGAAAGATACTGTTTGTGATGAAGTAATGAAGTTGAGGGAAGAAATAGAAAAACTAAGGGAAGAGAATGAGGTACAAAAGGAAGAACTGAAGCAAAAGGATGAAGAGAAGATAGAGGTGATTAAACAACTGAGTTTAGCAGTAGATTTGTTGAAGCAAGATAATGTGAGCATGAGAAGCTTCATTGCTAAAGAGTCCACTAAGAAATGGAAATTTCCATTTGAGTTCAACAAATTTGGAGCATTTTCTGTGAAATTGTTTAATGGGACTCCAAAGAATCAGCCAAGTGTTGAGCTCTCTACAAGACGTGGGTATTAA 906 0.3918 MKEKMAGMNKNQQSNWWWLDTHSNTKRSPWLQSTLSELNEKTDAMLKLIEEDADSFAKRAEMYYKKRPDLISMVEDFYRTHRSLAERYDQVKPDTGISHLVSGASPFASAKYQIEKLMSFADTGYDTYSENFDVDESVESEVDDPEHEEKEETKFHSYTKAERVWSTVAVNDEVMNLKNEIKRIKEENEIHKEQLKQKDTVCDEVMKLREEIEKLREENEVQKEELKQKDEEKIEVIKQLSLAVDLLKQDNVSMRSFIAKESTKKWKFPFEFNKFGAFSVKLFNGTPKNQPSVELSTRRGY* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0580 301 Pfam KIP1-like protein 16 89 IPR011684 GO:0003779
Psa3g0580 301 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 14 95 IPR011684 GO:0003779
Psa3g0580 301 PANTHER PROTEIN NETWORKED 4A 13 293 - -
Psa3g0580 301 PANTHER PROTEIN NETWORKED 3A-RELATED 13 293 - -
Psa3g0580 301 Coils Coil 167 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0580 Psa-Chr3 52667436 52670303 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0580 - - gmx:100783309 393.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g0580 3 52667436 52670303 Psa3g0580 3 52667436 52670303 ECH
Psa3g0580 3 52667436 52670303 Psa6g3843 6 334538550 334543931 PCT