Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g3828 ATGGACATGATCACAACGATGGTGAGTGATAAGGCTGTGGTAATATTCAGCAAGAGCACATGTTGTTTGAGTCACTCCATCTTGTCATTGATACGAAGCTTTGGTGCAAACCCAACTGTTTATGAGCTTGATGAGATGACAAATGGGCCACAGATCGAAAGAGCATTGATTCAATTTGGGTGCCAACCGAGTGTACCAGCTGTGTTTATTGGTCAACAATTCATCGGTGGATCTAAAAGAATCATGACCCTCCATCTTCAAAATGGGCTAGGACTAATGCTCAAATGA 288 0.4236 MDMITTMVSDKAVVIFSKSTCCLSHSILSLIRSFGANPTVYELDEMTNGPQIERALIQFGCQPSVPAVFIGQQFIGGSKRIMTLHLQNGLGLMLK* 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g3828 95 CDD GRX_GRXh_1_2_like 12 90 - -
Psa6g3828 95 ProSiteProfiles Glutaredoxin domain profile. 1 95 - -
Psa6g3828 95 Pfam Glutaredoxin 13 75 IPR002109 -
Psa6g3828 95 PANTHER MONOTHIOL GLUTAREDOXIN-S2 PROTEIN 1 94 - -
Psa6g3828 95 SUPERFAMILY Thioredoxin-like 2 95 IPR036249 -
Psa6g3828 95 PANTHER GLUTAREDOXIN 1 94 IPR011905 -
Psa6g3828 95 Gene3D Glutaredoxin 2 95 - -
Psa6g3828 95 TIGRFAM GlrX-like_plant: glutaredoxin-like family 5 95 IPR011905 -
Psa6g3828 95 PRINTS Glutaredoxin signature 13 31 IPR014025 -
Psa6g3828 95 PRINTS Glutaredoxin signature 58 71 IPR014025 -
Psa6g3828 95 PRINTS Glutaredoxin signature 72 85 IPR014025 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g3828 Psa-Chr6 332724374 332725019 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g3828 1 95 Miscellaneous Gene Families AT4G15690 54.737 1.27e-36 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g3828 K03676 - gmx:100811394 153.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g3828 6 332724374 332725019 Psa6g3828 6 332724374 332725019 ECH
Psa3g0569 3 51685468 51686272 Psa6g3828 6 332724374 332725019 PCT