Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0569 ATGGACACTGTCACAAGCATGGTAGGTGAAAAGCCAGTGGTGATATTCAGCAAGAGTACTTGTTGTTTGAGCCACTCTATAACATCGCTGATACGTAGCTTTGGAGCCAACCCTATTGTTTATGAGCTTGATAAAATCACAAACGGGTCGCAGATTGAAAGTGAGTTGCTTCAAATGGGGTGCAAACCAAGCGTGCCTGCTGTTTTCATAGGACAGCAGTTCAGAGGTGGTTCTAAGAAAATTATGAGTCTTCATGTGAGGAATGAGTTAGTGCCTATGTTGAAGGAGGCTGGTGCTATATGGATTTGA 309 0.4337 MDTVTSMVGEKPVVIFSKSTCCLSHSITSLIRSFGANPIVYELDKITNGSQIESELLQMGCKPSVPAVFIGQQFRGGSKKIMSLHVRNELVPMLKEAGAIWI* 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0569 102 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
Psa3g0569 102 Gene3D Glutaredoxin 1 101 - -
Psa3g0569 102 PANTHER GLUTAREDOXIN 1 101 IPR011905 -
Psa3g0569 102 PANTHER MONOTHIOL GLUTAREDOXIN-S2 PROTEIN 1 101 - -
Psa3g0569 102 TIGRFAM GlrX-like_plant: glutaredoxin-like family 4 102 IPR011905 -
Psa3g0569 102 CDD GRX_GRXh_1_2_like 12 93 - -
Psa3g0569 102 Pfam Glutaredoxin 13 74 IPR002109 -
Psa3g0569 102 SUPERFAMILY Thioredoxin-like 2 101 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0569 Psa-Chr3 51685468 51686272 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0569 1 102 Miscellaneous Gene Families AT4G15690 54.902 1.53e-41 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0569 K03676 - gmx:100789514 176.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g0569 3 51685468 51686272 Psa3g0569 3 51685468 51686272 ECH
Psa3g0569 3 51685468 51686272 Psa6g3828 6 332724374 332725019 PCT
Psa6g3833 6 333594505 333595605 Psa3g0569 3 51685468 51686272 PCT