Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g3721 ATGGCCATCACCACTCCCTGTCTCAATGCTTCCGAAAAGAAACACTGGTGGCTCACAAATCGTAAGATTGTTGAGAAATACATCAAAGACGCACGAACCCTCATTGCGACACAAGAGCGCAACGAGATTGTTTCAGCTCTGACTCTACTTGACGCGGCTCTTGCTATCTCTCCGTCCTCAGATCAAGCTCTCGAGCTTAAAGCGAGATCTTTGCTCTATTTGAGAAGATTCAAAGACGTAGCAAATATGCTTCAGGATTACATTCCGAGTCTCAAAATGGCTAACGATGATTCTGGCTCTGTTTCTTCGGATGGTTCTTCTCAACAGCTTTCAAGAGAAGGCGTCATGTTGTTATCTTCATCGGATTCCTCTGATCCAGATCAGAGTTTCTTCAAGTGCTTCTCTGTCTCTGATTTGAAAAAGCGAGTCATGGCTGGACTCTGCAAAAGTTCTGATAATGAAGGATATTGGAGATACTTGGTTTTGGGGAAAGCTTGTTGCCATTTAGGTCTAATGGAAGATGCATTGGTTCTTCTTCAAACCGGAAAACGCCTCGCCAGCGCCGCGTTCCGCCGCGAGAGCGTGTGTTGGTCCGACGACAGTTTCTCTCTATGGAGCACACCGTTTTCCGGCGATGCTATTTCGAAGCCAATCGCAACCACTCCACCTCGAAGCCCTCTATCAGAATCTGAAACCGTGAACCAGCTCATTGCACACATAAAATTCCTCCTCCGTCGACGCGCTGCCGCAATCGCTGCCATGGACGCTGGACTCCACACGGAAGCTATCCGTCACTTCTCGAAAATCGTCGATGGCCGCCGTGGTGCTCCACAAGGATTCCTTGCTGAATGCTACATGCACAGAGGCACTGCGTTTCGTTCAGCAGGTAGAATCGCTGATTCAATCGCGGATTGTAACAGAACACTATCACTGGATCCTACATGTATTCAAGCACTTGAAGCTAGAGCCTCAATTCTGGAAACCATTCGTTCCTATCAAGATTGTCTTCACGATCTTGAACACTTGAAGCTTCTATACAACACAATTCTGCGTGATCGTAAACTCGCCGGTCCATTATGGAAACGTCACAATGTCCGTTACAATGAGATTCCAGGAAAACTATGCACTCTCACCGCGAAAATTCAACAGCTGAAGCAGAAAATGGCGTCCGGTGAAACGCGTAATGTGGATTACTATGCTTTGATTGGTTTGCGACGCGGGTGTGGTCGACCGGAGTTGCAACGGGCTCATCTTTTGCTTTGTTTGAAGCATAAACCAGAGAAAGCCACGTGTTTCATTGACCGGTGTGAACTCGCAGATGAACGTGATCTTGAATCGGTTAAAGATCGAACGAGAATGGCTTCTATGTTGCTGTATAGATTGCTTCAGAAAGGCTATTCAAGTGTTATGAATTCCATTGTAGAAGATGAAACTGCAGAGAAAGAGAAACAGAGGAAAATGGCTTTTCAGTTGCAACAAACTTCTTCAAATGCAAATCCAAATGTTAATGCAAATGTAAATGTTAATGTTAATGCAAATGTACATTCGGTTGAAGTGTTGCAACAGAAAAGTAGAGATGAAAAAATGGAGGACAAGTTTGCGATGTCTTCGCCTAGCATTGCAAATCCAACGGTGTTTCAAGGAGTGTTTTGCCGAGATCTAACGGTGGTAGGGAACTTGCTTTCTCAAAGGTTTAGTAGTAGGTCAATTCCGGTCAAATACGAGGCTCTTAGTTGTTGA 1740 0.4523 MAITTPCLNASEKKHWWLTNRKIVEKYIKDARTLIATQERNEIVSALTLLDAALAISPSSDQALELKARSLLYLRRFKDVANMLQDYIPSLKMANDDSGSVSSDGSSQQLSREGVMLLSSSDSSDPDQSFFKCFSVSDLKKRVMAGLCKSSDNEGYWRYLVLGKACCHLGLMEDALVLLQTGKRLASAAFRRESVCWSDDSFSLWSTPFSGDAISKPIATTPPRSPLSESETVNQLIAHIKFLLRRRAAAIAAMDAGLHTEAIRHFSKIVDGRRGAPQGFLAECYMHRGTAFRSAGRIADSIADCNRTLSLDPTCIQALEARASILETIRSYQDCLHDLEHLKLLYNTILRDRKLAGPLWKRHNVRYNEIPGKLCTLTAKIQQLKQKMASGETRNVDYYALIGLRRGCGRPELQRAHLLLCLKHKPEKATCFIDRCELADERDLESVKDRTRMASMLLYRLLQKGYSSVMNSIVEDETAEKEKQRKMAFQLQQTSSNANPNVNANVNVNVNANVHSVEVLQQKSRDEKMEDKFAMSSPSIANPTVFQGVFCRDLTVVGNLLSQRFSSRSIPVKYEALSC* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g3721 579 PANTHER - 2 579 - -
Psa6g3721 579 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 2 579 - -
Psa6g3721 579 Gene3D Tetratricopeptide repeat domain 220 356 IPR011990 GO:0005515
Psa6g3721 579 SUPERFAMILY TPR-like 248 343 IPR011990 GO:0005515
Psa6g3721 579 CDD DnaJ 397 430 IPR001623 -
Psa6g3721 579 SMART tpr_5 156 189 IPR019734 GO:0005515
Psa6g3721 579 SMART tpr_5 282 315 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g3721 Psa-Chr6 324318396 324321086 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g3721 - - gmx:106797171 786.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g3721 6 324318396 324321086 Psa6g3721 6 324318396 324321086 ECH
Psa3g0473 3 44784654 44788206 Psa6g3721 6 324318396 324321086 PCT