Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0473 ATGGCGGTCACTACTCACTCTCTAACCGCTACAGAAAAGAAACACTGGTGGCTCACTAACCGAAAGATTGTTGAGAAATACTTGAAAGATGCTCGGAACTTAATAGCGACGCAAGAACAGAGCGAGATCGTTTCGGCTTTGAATCTTCTAGATGCGGCTTTAGCTATATCTCCGCGTTTAGATCACGCGCTTGAGTTGAAAGCGAGGTCGTTGCTTTATCTACGGCGGTTCAAGGATGTTGCTGATATGCTTCAAGAATATGTTCCGAGTTTGAGAATGGCGAATGAAGATCCTTCCTCTGGTTCTTCTTCTGAGTCGTCTTCTTCGAGGGAAGGTGTGAAGCTTCTCTCGTCTGATTCGCCGGTGAGAGATCAGAGTTTTAAGTGTTTCTCTGTTTCTGATCTTAAGAAAAAGGTTATGGCAGGTTTATGGAAAAGCTGTGATAAAGAAGGGCAATGGAGATATTTGGTTTTGGGTGAAGCATGTTGCCATTTAGGATTAATGGAGGATGCAATGGTTCTTCTTCAAACTGGAAAGCGGATTGCCAGTGCGGCATTCCGGCGAGAGAGTGTCTGCTGGTCGGACGACAGTTTTCCTCTGTTAACCATCCCGATTGCCGGAGATACGGCGAACCAACCAACCACCTCACCGCCACGAGTTCCTATAAATGTAACTGAAAGAGTAACACATCTCCTCAGCCACATTAAGTTTCTCCTTCGCCGTCGTGCAGCAGCACTTGCTGCACTTGATGCTGGTCTCTACTCGGAAGCCATCCGACATTTCTCAAAAATTGTAGATGGGCGCCGTGCTGCGCCACAAGGCTTCCTTGCGGAGTGTTACATGCATAGAGCCTCTGCAAACCGTTCTGCCGGTCGAATCGCCGAGTCTATAGCTGATTGTAACCGCACCCTTTCTTTAGACCCAACCTGCATTCAAGCCCTTGAAACCAGAGCTTCACTCTTTGAAACAATTCGTTGCTTACCTGATTCTCTACACGATTTAGAACATTTGAAACTTCTTTACAACTCCATCTTACGTGACCGGAAACTTCCTGGTCCGGCATGGAAGCGTCACAATGTCAGATACAGAGAGATTCCAGGGAAACTCTGTGCCTTAACCACCAAGATTCAAGAACTGAAACAAAGGTTAGCTTCTGGTGAAACAACTAGTGTTGATTACTATGCATTGATTGGGATTCGACGAGGTTGTTCGCGGTCCGAATTGGAGAGGGCTCATTTGTTGCTTTGTCTTCGCCATAAACCGGATAAAGCTACAAATTTCATCGAACGGTGTGAGTTTGCAGACGAACGTGATATCGATACAGTTAAGGAGAAAGCAAAGATGTGTTCATTGTTATTGTACAGATTGATTCAAAAGGGTTACACGAGTGTGATGAGTAATGTGTTGGACGAAGAAGCCGCTGAAAAACAAAGAAAGAAAAACTCTGTCGCCGCTGCAGCACAAGCACAAGTGCAGGCACAAGCACAGGCTCAAGCACAAGCACAGGTAGCCGCCATTCAAGCAATTAAGAAAACAAATGAAGCTGAGTTGAAAAACAACAAGCCTGAAGTTAAGATTGGTAATGTTTTAGTTGAAAATGATCAGTCTCAGTCTCTGATATCTTCCTGTACCGTAAACCCTGCTGTGTTTCAAGGTGTGTTTTGCCGCGATCTTGCGGTGGTCGGAAACTTGTTGACGCAGGTGGGATTTAATCGACCGATTCCAGTGAAGTATGAAGCATTGAGCTGCTAA 1752 0.4549 MAVTTHSLTATEKKHWWLTNRKIVEKYLKDARNLIATQEQSEIVSALNLLDAALAISPRLDHALELKARSLLYLRRFKDVADMLQEYVPSLRMANEDPSSGSSSESSSSREGVKLLSSDSPVRDQSFKCFSVSDLKKKVMAGLWKSCDKEGQWRYLVLGEACCHLGLMEDAMVLLQTGKRIASAAFRRESVCWSDDSFPLLTIPIAGDTANQPTTSPPRVPINVTERVTHLLSHIKFLLRRRAAALAALDAGLYSEAIRHFSKIVDGRRAAPQGFLAECYMHRASANRSAGRIAESIADCNRTLSLDPTCIQALETRASLFETIRCLPDSLHDLEHLKLLYNSILRDRKLPGPAWKRHNVRYREIPGKLCALTTKIQELKQRLASGETTSVDYYALIGIRRGCSRSELERAHLLLCLRHKPDKATNFIERCEFADERDIDTVKEKAKMCSLLLYRLIQKGYTSVMSNVLDEEAAEKQRKKNSVAAAAQAQVQAQAQAQAQAQVAAIQAIKKTNEAELKNNKPEVKIGNVLVENDQSQSLISSCTVNPAVFQGVFCRDLAVVGNLLTQVGFNRPIPVKYEALSC* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0473 583 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 583 - -
Psa3g0473 583 SUPERFAMILY TPR-like 243 338 IPR011990 GO:0005515
Psa3g0473 583 CDD DnaJ 392 426 IPR001623 -
Psa3g0473 583 PANTHER - 1 583 - -
Psa3g0473 583 SUPERFAMILY Chaperone J-domain 388 426 IPR036869 -
Psa3g0473 583 MobiDBLite consensus disorder prediction 95 117 - -
Psa3g0473 583 Gene3D DnaJ domain 377 512 IPR036869 -
Psa3g0473 583 MobiDBLite consensus disorder prediction 94 117 - -
Psa3g0473 583 Gene3D Tetratricopeptide repeat domain 232 350 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0473 Psa-Chr3 44784654 44788206 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0473 - - gmx:100808420 874.004
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g0473 3 44784654 44788206 Psa3g0473 3 44784654 44788206 ECH
Psa3g0473 3 44784654 44788206 Psa6g3721 6 324318396 324321086 PCT