Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g3566 ATGGCCATGGAAGCTTCTTTCTTCCTCTTGTTCATCTCTTCTCTCTTAATTTCATGTTCCGGATCTTTGGTGGGTTTTTCCTATCATGAGAGAGGAGACACTTGGAAATCATTTCTTCAGCCGAGCAAAGTTTCATCGTCTCAGATTCGAGTTTTCGTAACAGATCATAGGATTTTGAGTACTCTTACCAACTCAAACATGTTAGTTGATCTATACTTGAGCAAAAGCCAAGTTGAAAATTTCATTACTTCAAAACCTTCAGCGACTTCTGAACTAAAAGCTCAACTTGTAAATTTTCTTCCACGTTCAAACATCAAAAGCATCATTGTTAGCTGTGGAAGTGAGTGTTTAGTCCAAAATGAGATACCTTTGATTATGAATGCTCTTGAATCAATTTATTCAATTCTCAGAGATCTTCACATTAGTAATGAAGTAAAACTCTCGGTAGCATTTCCACTTCAATTCTTAACGAAGATGAATCCATCACGAGAGCACGAAATTCGTAAGCTACTTTCGTTTATAAAGGAAACAGAATTGTTTGTGACATTAGAAGACACCATTGATGGAGAATTAAGCATGGAGGATCATTTTGTTCAAACTGTTATCAAGCGAGCCGCTCTGGCTGCTTCTGTTCTTCCTTGCAATGATGTTCCTGTGGTTCTGACAATCAAGAGTTCGGTTATACCAAGTTCAGTAGAATTAGCCGAATTTAGTAAAAGAGTATCAAAATATTTAGCAGCAAGAAGACCTATTGCGAAAAGAATAGCTGCGTTATACTTAGAACTGCATACAACAGAAGATTTTTCAATGAAAGAGCTCAAAAGGGAAGAAGAGAAAGAAAATTTTCCATCTTCTAGAAGAGAGATCTTAAGCAAATTACACCGAAGAAAAACTCTAGATGGCACAAACAGTCCAACAAACACAGTTTACCCTACGAATCCAACACCAAATCCAACACCAGTGATCACACCCTCAGATACACCAACCATTATAGCGGTTCCTTCCACAAATCCTGTCACGATTTCCCCTACAAATCCAGCTGCAATGCCCGTAACGGTTCCTTCTACTACACCTGCCGTTCCTTCTACTACACCTGCTGTTCCTTTACCTCCAACAAATCCAACCAATTCACCGGTTCCGGTCTTCAATCCAGCTACAACACCTTCAACTGTTCCAGGTGCGCAACCAGTAACCAACCCTGTAACGTCTTATCCACCTCCATCGGGAAGTGTTCCTGTTCCTGTCATAAACCCTCCTTCAAACACAAATGCTCCTTCTGTTCAGGGACAGAGTTGGTGTGTGGCGAAAGCAGGTGCTCCACAAGCCTCCCTTCAATCAGCATTGGATTATGCTTGTGGAATGGGTGCTGATTGTTCTCAGATACAGCAGGGTGGGAGTTGTTTCAGTCCAGTCACTTTGCAGAGTCATGCTTCTTTTGCTTTCAATAGTTACTATCAAAAGAATCCAGCTCCAACAAGTTGCGACTTTGGAGGCGCTGCCACCTTAATTAACACAAATCCAAGTTCTGGTTCTTGCATTTTTCCATCATCATCGTCGTCGTCATCCTCAACGCCAACGATATCATCCCCAACACCACCTACACAATCAACTCCAACTGCAATACCACCACCAAGTCCAATAACAACTGCACCATCTATTCCAACGATAGCTCCACCATCTATTCCAACAATAGCTCCACCATCAATTCAAACAGCTCCATCATCCATTCCAACGGTTCCACCAACATCTTCAGGATCGGGAACAGGAACTTTCGGCTATGGTACTCCGCCTTCAGTGTTAAATTCAAGCAGCCCAGATTCAGGTGCAATGCCAGATTTTGGATCCGATAGCCCTCCAGTTGTGAACACAACGTCTGCCTCACACCCTCGAGCTCTAAAATCTTTTACTGGCTGCATAATTTTGATGATTCCATTCGTCACTGCCAGACTCAGCATGCTACCATAG 1965 0.4214 MAMEASFFLLFISSLLISCSGSLVGFSYHERGDTWKSFLQPSKVSSSQIRVFVTDHRILSTLTNSNMLVDLYLSKSQVENFITSKPSATSELKAQLVNFLPRSNIKSIIVSCGSECLVQNEIPLIMNALESIYSILRDLHISNEVKLSVAFPLQFLTKMNPSREHEIRKLLSFIKETELFVTLEDTIDGELSMEDHFVQTVIKRAALAASVLPCNDVPVVLTIKSSVIPSSVELAEFSKRVSKYLAARRPIAKRIAALYLELHTTEDFSMKELKREEEKENFPSSRREILSKLHRRKTLDGTNSPTNTVYPTNPTPNPTPVITPSDTPTIIAVPSTNPVTISPTNPAAMPVTVPSTTPAVPSTTPAVPLPPTNPTNSPVPVFNPATTPSTVPGAQPVTNPVTSYPPPSGSVPVPVINPPSNTNAPSVQGQSWCVAKAGAPQASLQSALDYACGMGADCSQIQQGGSCFSPVTLQSHASFAFNSYYQKNPAPTSCDFGGAATLINTNPSSGSCIFPSSSSSSSSTPTISSPTPPTQSTPTAIPPPSPITTAPSIPTIAPPSIPTIAPPSIQTAPSSIPTVPPTSSGSGTGTFGYGTPPSVLNSSSPDSGAMPDFGSDSPPVVNTTSASHPRALKSFTGCIILMIPFVTARLSMLP* 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g3566 654 Gene3D Glycosidases 24 184 - -
Psa6g3566 654 Pfam X8 domain 432 501 IPR012946 -
Psa6g3566 654 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 142 619 IPR044965 GO:0004553|GO:0005975
Psa6g3566 654 MobiDBLite consensus disorder prediction 514 530 - -
Psa6g3566 654 MobiDBLite consensus disorder prediction 514 540 - -
Psa6g3566 654 PANTHER CARBOHYDRATE-BINDING X8 DOMAIN PROTEIN 142 619 - -
Psa6g3566 654 Gene3D - 426 528 - -
Psa6g3566 654 SMART X8_cls 431 514 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g3566 Psa-Chr6 300851235 300853452 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g3566 396 517 Glycoside Hydrolase AT2G05790 47.287 8.88e-27 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g3566 - - cam:101499863 756.133
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g0346 3 33888387 33890650 Psa6g3566 6 300851235 300853452 PCT