Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0346 ATGGCAAATCAAGCTTCATTATGCTTCTTGTTCTTCTCTTTTCTCACTCTCTTTGCAGAAAACAATGCATTATTGACTAGATTCCTTCATAACAGCAAGATCTCGAAATCTCAGATTCAGATTAGGAGAACTCTACAAGACACTAATCCAGCTTCAACTTCGCCAACAATCATCACTGTTCCTTCAACAAATCCAGGTGCTACAAATCTTGTTCCTTCTACCACACCGCCAACGAATCCAGCAAACTCGCCAGTTCCTGTTACAAATCCTGTTACAGCTCCTGTAACAGTTCCTGTGAGTTCTTATCCACCACCTTCACCGTTATCAGGAGCCGTTCCTGTTCCTGTTACAAATCCTCAGCTTCAGCCTCCTCCTTCAAACATGAATCCTCCTCCATCTTCATCTTCATCTTCTCAAGGAGGAGGTGGTGGTAGCTGGTGTGTGGCTAAACCTGGAGTTTCACAAACTACACTTCAGACTGCTTTGGATTATGCTTGTGGGACTAATGGTGCTGATTGTTCACAAATACAACAAGGTGGAATCTGTTATAATCCTAATTCACTTTCAAACCATGCTTCTTTTGCTTTCAATAGCTACTACGTAAAGAATCCTGCTCCAACTAGCTGTGACTTTGGAGGGGTTGCTACCATTGTTACCACCAATCCTAGTACTGGTACTTGCATCTTTCCATCATCTTCAGGAGGAGCAGGCTCATCCGGCTCTGGTTCTAACTCACCTTCAATAGGTTTTGGTGGGCCTTCAACCTCTCCGGATTCATCTCACTCAACTGGTGTGAGGCCTTTGCTAAGTTTCATGATTCTGATGACATTATTGGCCAGCGGAAGACTCGCGAGTCCATAG 861 0.4402 MANQASLCFLFFSFLTLFAENNALLTRFLHNSKISKSQIQIRRTLQDTNPASTSPTIITVPSTNPGATNLVPSTTPPTNPANSPVPVTNPVTAPVTVPVSSYPPPSPLSGAVPVPVTNPQLQPPPSNMNPPPSSSSSSQGGGGGSWCVAKPGVSQTTLQTALDYACGTNGADCSQIQQGGICYNPNSLSNHASFAFNSYYVKNPAPTSCDFGGVATIVTTNPSTGTCIFPSSSGGAGSSGSGSNSPSIGFGGPSTSPDSSHSTGVRPLLSFMILMTLLASGRLASP* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0346 286 Gene3D - 143 233 - -
Psa3g0346 286 Pfam X8 domain 146 216 IPR012946 -
Psa3g0346 286 SMART X8_cls 145 229 IPR012946 -
Psa3g0346 286 MobiDBLite consensus disorder prediction 238 261 - -
Psa3g0346 286 PANTHER CARBOHYDRATE-BINDING X8 DOMAIN PROTEIN 48 258 - -
Psa3g0346 286 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 48 258 IPR044965 GO:0004553|GO:0005975
Psa3g0346 286 MobiDBLite consensus disorder prediction 123 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0346 Psa-Chr3 33888387 33890650 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0346 145 274 Glycoside Hydrolase AT1G66250 41.007 4.25e-28 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0346 - - gmx:100789503 197.978
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g0346 3 33888387 33890650 Psa3g0346 3 33888387 33890650 ECH
Psa3g0346 3 33888387 33890650 Psa6g3566 6 300851235 300853452 PCT