Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g3517 ATGAACACAATCACCCTCCTTCGAAACCGCGCTATAAATTCCGCGCGAAGAATCCTCATTGCTTCTAACAATCCATCGTTTTTTCTTTCTCCACTACATCACCATGCCAACGATTTTCCGCAACCACGTTTCAATCTTCACCGCACCCAAAATCCCCACCCTTTTCGAATACTAGGGTTTCGCCACGAATCAATTGGTGCTCATAATAGGGATGTTTCAACTATTGCAAGAGCTGGATTCAAACTTCGAAATTTCTCAACTTCCATTGAGACGCGAGGCGGTGACAATACCTTTGAGAGGATTTACATTCAGAGTGGTGTGAATGTGAAGCCATTCACGGTGGAAAGTGTTCATAAGGGTGAAGAGAATGATGTTAGAGAAGAAGAGTCTCTTGTGGAAAAACAAGCTTGGAAGTTGTTGAAGGATGCTATTGTGACTTATTGTGGGAATCCTGTGGGGACAGTCGCTGCAAATGATCCAGGTGACAAATCGCCATTGAATTATGATCAGGTTTTTATTAGGGATTTTATTCCTTCAGCTCTTGCTTTCTTGCTTAAAGGAGATAATGAGATTGTCAAGAACTTTCTTCTTCATACCTTGCAGTTGCAGAGTTGGGAGAAAACTGTGGACTGCTACAGTCCAGGACAGGGCTTGATGCCTGCTAGTTTCAAAGTTAGAACTGTAGCTATTGACGGGGATACTCAAGAAGAAGTTTTAGATCCTGATTTTGGGGAATCAGCTATTGGTCGTGTTGCACCTGTAGATTCAGGATTATGGTGGATCATCCTATTGCGGGCTTATGGGAAGATCACTTGTGACTATAGCTTGCAAGAAAGGGTTGATGTTCAAACAGGGTTGAAAATGATTCTTAAACTGTGTTTAACAGATGGCTTTGATATGTTTCCATCTCTGCTAGTCACTGATGGGTCTTGCATGATAGACAGGCGTATGGGCATTCATGGTCACCCCCTTGAAATCCAAGCATTATTTTACTCAGCTCTTCGCTGTTCGCGTGAAATACTAGTTGTAACTGATGAAACCAATGATCTTGTTAGAGCCATTAACAACAGACTGAGTGCACTGTCATTCCACATTAGACAATATTACTGGGTGGATATGAAAAAGATGAATGAAATATACAGGTATAAAACAGAAGAGTACTCCATGGATGCTATCAACAAATTCAACATCTATCCAGAACAAATTCCTTTTTGGGTAATGGATTGGATTCCTGAAAAAGGTGGATATCTAATTGGGAATCTGCAACCAGCTCACATGGATTTCCGGTTTTTTACACTGGGAAATCTTTGGTCTATTATTTCATCTCTGAGCACCCAAAAACAGAGCGAGTCTATTTTAAATCTGATGCAAGAAAAATGGGATGATCTCGTGGGGCACATGCCACTTAAAATATGTTATCCTGCCTTGGATAATGAAGAGTGGCGGATAATTACGGGTAGTGATCCAAAAAATACCCCTTGGTCATATCACAATGGTGGATCCTGGCCTACCCTTCTGTGGCAGTTCACACTGGCATGCATCAAAATGGGAAGAATTGAACTAGCTCAGAAAGCAGCTGATTTAGCTGAGAAAAGGCTGCCAGTTGATTCTTGGCCTGAATATTACGATACTCGTTCCGGAAAATTTATTGGAAAACAAGCTCGGATGTATCAAACATGGACCATAGCTGGGTTCCTTACATCCAAGATGCTTTTGAAGAATCCTGAAAAGGCATCCATGTTATTCTGCGAGGAAGATTATGATCTTCTTGAGTATTGTGTTTGCGGACTTAGCCAGAGGGGAAGAAAAAAATGCTCCCGTATTGCTGCCAAGTCTCAGATTCTTGTATGA 1851 0.4155 MNTITLLRNRAINSARRILIASNNPSFFLSPLHHHANDFPQPRFNLHRTQNPHPFRILGFRHESIGAHNRDVSTIARAGFKLRNFSTSIETRGGDNTFERIYIQSGVNVKPFTVESVHKGEENDVREEESLVEKQAWKLLKDAIVTYCGNPVGTVAANDPGDKSPLNYDQVFIRDFIPSALAFLLKGDNEIVKNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRTVAIDGDTQEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITCDYSLQERVDVQTGLKMILKLCLTDGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYSALRCSREILVVTDETNDLVRAINNRLSALSFHIRQYYWVDMKKMNEIYRYKTEEYSMDAINKFNIYPEQIPFWVMDWIPEKGGYLIGNLQPAHMDFRFFTLGNLWSIISSLSTQKQSESILNLMQEKWDDLVGHMPLKICYPALDNEEWRIITGSDPKNTPWSYHNGGSWPTLLWQFTLACIKMGRIELAQKAADLAEKRLPVDSWPEYYDTRSGKFIGKQARMYQTWTIAGFLTSKMLLKNPEKASMLFCEEDYDLLEYCVCGLSQRGRKKCSRIAAKSQILV* 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g3517 616 PANTHER - 67 616 IPR024746 GO:0033926
Psa6g3517 616 Pfam Alkaline and neutral invertase 136 575 IPR024746 GO:0033926
Psa6g3517 616 SUPERFAMILY Six-hairpin glycosidases 144 579 IPR008928 GO:0005975
Psa6g3517 616 PANTHER ALKALINE/NEUTRAL INVERTASE A, MITOCHONDRIAL 67 616 - -
Psa6g3517 616 Gene3D - 166 566 IPR012341 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g3517 Psa-Chr6 297684809 297691774 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g3517 - - gmx:100797025 1004.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g0328 3 32842938 32845758 Psa6g3517 6 297684809 297691774 PCT