Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0328 ATGACCGCTATCAACCTGATTAGTAATTGTACCATGAAACCTTCCTCTAGATTTCTCCTAATTGGTAGAAAGAAATCATCTTTTCTCTCAAGATGTCACCACCATTCTCTTACAATGTCTAATAAACCTCTTGTTCTCAATCTTAATCACAAAACCATGCACTACCCTTCTTCTATCTTTCAATTTGGACGCCTAATGAACGGTTTTCAACAAGTTTTACGGTTACCCTCTTGGAACTTGTGCCATTCAACAACATGTCTCAGAATAAGAGCAACCAAAACAGAAAGAGTTTCTTGTATTGATGGAGTGTCCTTCAAGGCACGTGAATTCTCGAACTCCGTCGAGACCAAGGGTAGAGGAGATGGAGAAGATACGAAGGAGAAGAATTGTGATGGTTTGAAGAATTGTGATGAGGAAGAAACAGATGTGGAGAAAGAAGCATGGAAATTATTGCAAAAAGCACTTGTTACGTATTGTGATACACCGATTGGAACCGTTGCGGCAAATGATGAATCGGATAAAGGCTCACCTTTGAATTATGATCAGGTTTTTATCAGAGATTTTGTCCCTTCTGCTCTTGCTTTCTTGCTCAAAGGAGAAAAAGAGATTGTCAAGAACTTTCTCCTTCATACCTTGCAACTCCAGAGTTGGGAGAAAACAGTGGATTGCTATAGCCCGGGACAGGGCTTGATGCCTGCAAGTTTCAAAGTTAAAACTATGGAATTTGATGACAAAGAGACAGGAGAGGTTTTAGATCCTGATTTTGGAGAATCAGCCATCGGTCGCGTTGCTCCGGTCGATTCAGGATTGTGGTGGATCATTCTGCTTAGGGCTTATGGAAAACTGACTGGTGACTATACCTTGCAAGAAAAGTTGGAAGTTCAAACAGGCTTACAAATGATCCTTAACTTGTGTTTATCAGATGGATTTGACATGTTTCCTTCTCTGCTAGTAACTGATGGATCTTGCATGATAGATAGAAGGATGGGTATTCATGGCCACCCTCTTGAGATTCAAGCATTATTTTACTCGGCTCTTCGCTCGGCTCGTGAAATGGTTATCATAAACGATGAACATAGTAATCTGGTCGGCGAAATCAACAATAGACTAAGTGCATTGTCTTTTCACATTAGAGAGTATTATTGGTTGGATATGAGAAAGGTGAATGAAATCTATAGGTATAAAACAGAAGAGTACTCTTTAGATGCAACTAACAAGTTCAACATTTATCCAGAACAAATTCCAATGTGGTTAATGGATTGGGTTCCGGAAGAAGGTGGTTATTTGATAGGAAACCTGCAACCTGCTCACATGGATTTTCGGTTTTTCATGCTTGGAAATCTTTGGGCTATCGTTTCGTCTTTAGGTACACCGAGACAGAACAAATCGATTTTGAATCTTATAGAATCAAAATGGGATGATCTCGTTGGTGAAATGCCGCTTAAGATATGTTATCCTGCCTTGGAACATGAAGAATGGCGCTTAATCACCGGCAGCGATCCTAAGAATACTCCTTGGTCATATCACAATGGCGGATCTTGGCCTACTCTGATGTGGCAGTTTACGTTAGCATGCATCAAAATGGGAAGGACGGATCTAGCCGAGAAGGCGGTTGGTTTGGCGGAGAAAAGGCTTCCATTTGATTCATGGCCGGAATACTACGACACGAAAACGGGAAGATTTATTGGAAAACAAGCCAGGCTTTTTCAAACATGGACATTAGCCGGGTTTCTTGCATCTAAGATGCTTTTGAAGCATCCTGAAATAGCATCATTGTTATGTTGGGATGAAGATCTTGATATTCTTGAATCATGTGTTTGTGTACTTAATAAGAGTGGTAGGACAAAATGCTCTCGTGATGTTGCAAAGTCACACATTTTAGTATGA 1887 0.4043 MTAINLISNCTMKPSSRFLLIGRKKSSFLSRCHHHSLTMSNKPLVLNLNHKTMHYPSSIFQFGRLMNGFQQVLRLPSWNLCHSTTCLRIRATKTERVSCIDGVSFKAREFSNSVETKGRGDGEDTKEKNCDGLKNCDEEETDVEKEAWKLLQKALVTYCDTPIGTVAANDESDKGSPLNYDQVFIRDFVPSALAFLLKGEKEIVKNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVKTMEFDDKETGEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKLTGDYTLQEKLEVQTGLQMILNLCLSDGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYSALRSAREMVIINDEHSNLVGEINNRLSALSFHIREYYWLDMRKVNEIYRYKTEEYSLDATNKFNIYPEQIPMWLMDWVPEEGGYLIGNLQPAHMDFRFFMLGNLWAIVSSLGTPRQNKSILNLIESKWDDLVGEMPLKICYPALEHEEWRLITGSDPKNTPWSYHNGGSWPTLMWQFTLACIKMGRTDLAEKAVGLAEKRLPFDSWPEYYDTKTGRFIGKQARLFQTWTLAGFLASKMLLKHPEIASLLCWDEDLDILESCVCVLNKSGRTKCSRDVAKSHILV* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0328 628 PANTHER - 5 122 IPR024746 GO:0033926
Psa3g0328 628 PANTHER - 128 628 IPR024746 GO:0033926
Psa3g0328 628 Gene3D - 178 573 IPR012341 GO:0005975
Psa3g0328 628 SUPERFAMILY Six-hairpin glycosidases 146 579 IPR008928 GO:0005975
Psa3g0328 628 Pfam Alkaline and neutral invertase 147 587 IPR024746 GO:0033926
Psa3g0328 628 PANTHER ALKALINE/NEUTRAL INVERTASE 128 628 - -
Psa3g0328 628 PANTHER ALKALINE/NEUTRAL INVERTASE 5 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0328 Psa-Chr3 32842938 32845758 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0328 - - mtr:MTR_7g111890 1100.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g0328 3 32842938 32845758 Psa3g0328 3 32842938 32845758 ECH
Psa3g0328 3 32842938 32845758 Psa6g3517 6 297684809 297691774 PCT