Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g2848 ATGGAAGATGGCAAAGTAGTGAAGGAAGAGGAGTACACAGAAGATGGAACAGTGAATCTTAAAGGAAAACCAGTTCTTAGATCCAAAACTGGTGGTTGGAAAGCATGTTCCTTTGTTGTTGTGTATGAAATATTCGAAAGAATGGCATATTATGGAATATCATCAAATTTGATTCTGTATCTAACAAAGAAGCTAAACCAAGGAACTGTAACTGCTTCAAACAATGTAACCAACTGGGTTGGAACCATTTGGATAACACCAATACTAGGTGCTTACGTTGCTGATGCTCACCTTGGTCGTTTTTGGACTTTTCTCATTGCTTCCACTATTTATCTATCGGGTATGTCTCTGCTAACACTAGCAGTGTCGCTTCCTAGTTTAAAGCCACCTAAATGCATTGAAATAGATCTAACAAAATGTAAAAGAGCTTCAACATTACAATTAGCTGTGTTTTATGGTGCACTCTATACTCTAGCAATAGGAACAGGTGGAACAAAACCGAACATTTCCACCATTGGTGCTGACCAGTTTGATGATTTTCATCCAAAGGAAAAATCACACAAGCTCTCGTTTTTCAATTGGTGGATGTTTAGTATCTTCTTTGGGACACTTTTTGCTAACACTGTTTTGGTTTATGTCCAAGATAACGTTGGGTGGACTCTTGGTTATGCTTTACCAACTTTAGGACTTGCGATATCGATTATGATATTCTTGGCAGGAACGCCGTTTTATAGACATAAATTGCCTGCGGGAAGTACTTTCACTAGAATGGCTAGGGTCATTGTTGCTGCTCTAAGAAAACGGAAAGTTCCGATTCCGAATGACACTAAAGAACTATATGAACTTGATATGGTAGAGTATGCTAAGAAAGGGAGTAACACTTACAGAATTGATTCTACTCCAACATTGAGGTTCCTAGACAAGGCATGTGTGAAAACAGGCTCAACTAGTCCATGGATGTTATGCACAGTTACACATGTAGAAGAGACAAAACAAATGCTAAGGATGATTCCGATTTTGGTTGCTACATTTGTTCCAAGTACAATGATAGCACAAATAAACACTCTTTTTGTAAAACAAGGAACAACACTTGACAGACACATTGGAAGCTTCAAAATTCCACCAGCAAGTCTAGGTGCATTTGTCACATTGTCTTTGCTTGTCTGCGTAGTGCTCTACGACCGTTTCTTCGTTAGGATCATGCAGAGATTCACCAGGAATCCAAGAGGGATTACCCTTCTTCAAAGAATGGGAATCGGTCTTGTTATCCACACGATTATCATGGTTATTGCATCTTTGACAGAAAGATACAGACTAAGTGTTGCAAAAGAACATGGTTTAGTTGAAAGTGGAGGACAGGTTCCCCTAAGTATTTTCATTTTGCTTCCTCAGTTTATACTTATGGGAACAGCGGATGCGTTTTTAGAAGTTGCGAAAATCGAGTTTTTCTATGATCAAGCACCGGAAAGCATGAAGAGTGTTGGAACTTCATACTCATCAACTACATTAGGCATTGGAAATTTCATGAGTTCATTTCTTCTGTCAACAGTTTCACACATAACTAAGCAACATGGTCATAGAGGGTGGATTTTGAACAATCTGAATGAGTCTCATCTTGATTACTACTACGCGTTTTTCGCTGTGTTGAACTTGTTGAACTTAGTCTTCTTCGCGATTGTTACAAGGTTTTATGTGTATAGGGTTGAAGTTTCGGATTCCATTCAAGTGCTTGCAGAAGAACTGAAGGAAAAAAGAACGGCTAACCAAGTGAACCTTGTAGAATAA 1785 0.3871 MEDGKVVKEEEYTEDGTVNLKGKPVLRSKTGGWKACSFVVVYEIFERMAYYGISSNLILYLTKKLNQGTVTASNNVTNWVGTIWITPILGAYVADAHLGRFWTFLIASTIYLSGMSLLTLAVSLPSLKPPKCIEIDLTKCKRASTLQLAVFYGALYTLAIGTGGTKPNISTIGADQFDDFHPKEKSHKLSFFNWWMFSIFFGTLFANTVLVYVQDNVGWTLGYALPTLGLAISIMIFLAGTPFYRHKLPAGSTFTRMARVIVAALRKRKVPIPNDTKELYELDMVEYAKKGSNTYRIDSTPTLRFLDKACVKTGSTSPWMLCTVTHVEETKQMLRMIPILVATFVPSTMIAQINTLFVKQGTTLDRHIGSFKIPPASLGAFVTLSLLVCVVLYDRFFVRIMQRFTRNPRGITLLQRMGIGLVIHTIIMVIASLTERYRLSVAKEHGLVESGGQVPLSIFILLPQFILMGTADAFLEVAKIEFFYDQAPESMKSVGTSYSSTTLGIGNFMSSFLLSTVSHITKQHGHRGWILNNLNESHLDYYYAFFAVLNLLNLVFFAIVTRFYVYRVEVSDSIQVLAEELKEKRTANQVNLVE* 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g2848 594 PANTHER PEPTIDE TRANSPORTER 16 576 - -
Psa6g2848 594 Pfam POT family 101 530 IPR000109 GO:0016020|GO:0022857|GO:0055085
Psa6g2848 594 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 16 576 IPR000109 GO:0016020|GO:0022857|GO:0055085
Psa6g2848 594 Gene3D MFS general substrate transporter like domains 5 572 IPR036259 -
Psa6g2848 594 SUPERFAMILY MFS general substrate transporter 25 562 IPR036259 -
Psa6g2848 594 CDD MFS_NPF5 33 566 IPR044739 GO:0042937|GO:0042938|GO:0071916
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g2848 Psa-Chr6 233409836 233413829 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g2848 10 591 Organic Solute Cotransporters AT5G46040 67.637 0.0 790
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g2848 - - gmx:547471 1022.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g2848 6 233409836 233413829 Psa6g2848 6 233409836 233413829 ECH
Psa3g1303 3 117635554 117638036 Psa6g2848 6 233409836 233413829 PCT