Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1303 ATGGAAGTCAGTGAAGAAAAAGGGCCACTAGAAGATTATACTAAAGATGGCACGGTAGATTCACAAGGTAGACCTGTTTTAAGATCGAAGACGGGAAGATGGAAAGCATGTTCCTTCCTAGTAGGGTATGAATTGTTTGAGAGGATGGCTTACTATGGAATATCAACGAACTTAGTGGTGTATTTAACGAATAAGCTTCATCAGGGGACCGTGGAATCTTCGAACAATATTAGCAATTGGGGAGGATCGGTGTGGTTGATGCCGCTTGCGGGAGCTTATGTAGCTGATGCTTATCTTGGCCGATATTTGACCTTTGTAATTGCATCGGGCATTTATCTCATGGGAATGTGTTTGTTGACTCTATCAGTTTCACTACCATCGTTGAGGCCGCCAGAATGTGCCAAAGGTGTTGCGTTCGAAAACTGCCCCAAGGCATCTCCGTTGCAAAAGGGTGTTTTCTTCCTTGCCTTGTACATCATTGTTCTGGGCACTGGCGGAACCAAACCCAACATTTCTACAATGGGAGCAGACCAATTTGATGACTTCGATCCTAAGGAGAAATCTCATAAGTTTTCCTTCTTCAATTGGTGGTATTTTAGCATTTTGATTGGTGTCTTGTTCTCTACTACTTTCTTGGTTTACATACAAGATAATATAGGTTGGACCCTCGGATACGGCCTTCCAACCATTGGACTCGCATTTTCGATATTGGTGTTTCTATTAGGAACACCATATTATAGACACAAATTGCCCCAAGGGAGCCCTATGACAAGGATGCTTCAAGTATTCGTGGCTGCTGTGAGAAAATGGAAGGTGTGTGTCCCCGAAGATACAAATGAGCTGCATGAGCTGAGTATGGAAGAGTATGCATGTAATGGTAGAAACAGAATTCCTCACACATCTTTCTTCAGTTTCCTTGACAAAGGGGCTATAAAGACTGGACAAAGTTCACCATGGATGCTTTGTACAGTGACACAAATTGAGGAAACTAAGCAAATGGCAAAATTGATTCCTATTTCGATTTTCACAATTATTCCAAGCACATTAGGAATGCACTTATTCACACTCTTTGTTAAACAAGGCATGACTCTAGACAACAGAGTGGGACATCATTTTAATATATCTCCAGGAAGTCTCCTATCAATTACAATTATATTCACATTGATATGGATTCCAATGTATGATCGGATTTTTGTGCCTTTCATCCGACGCTACACTAAAAATCCTAGAGGAATCACAATACTGCAAAGAATAGGAATTGGCCTTGTGTTTTACATCATTATATTAGTCATTGCTTGCTTAGTTGAGAGAAAGAGACTCAGGGTTGCAAAAGAAAACAACCTCTTAGGCATGCATGATACAATACCTCTCACTATTTTCATTCTACTCCCTCAGTTTGCCTTGTCGGGGATTGGTGATAACTTTGTCGAAATTGCCAAGTTGGAGTTCTTCTACGATCAAGCACCAGAAAGCATGAAGAGTCTCGGAACAGCATGTGCCACAGCCTCATATGGTCTAGGTGGTTTTCTCAGTACCTTTTTTCTATCTGCTGTCGCAGATATCACCCAAAGACAAGGTCGCAAAGGTTGGATTTTGGATAATATCAATGTCTCCCATTTAGATTATTATTATGCATTCATTGCAGTAATAAGCATATTAAATTTCATTTGCTTTCTGGTTGTTGCAAAGTTCTTTGTGTATAATGATGTAAAATACACCAGACCGGTCTTAGAGATGAACGCTACTTCATCTCAGGACAGTGGCACTTCACAACCAGATGCCAAGTACTAG 1791 0.407 MEVSEEKGPLEDYTKDGTVDSQGRPVLRSKTGRWKACSFLVGYELFERMAYYGISTNLVVYLTNKLHQGTVESSNNISNWGGSVWLMPLAGAYVADAYLGRYLTFVIASGIYLMGMCLLTLSVSLPSLRPPECAKGVAFENCPKASPLQKGVFFLALYIIVLGTGGTKPNISTMGADQFDDFDPKEKSHKFSFFNWWYFSILIGVLFSTTFLVYIQDNIGWTLGYGLPTIGLAFSILVFLLGTPYYRHKLPQGSPMTRMLQVFVAAVRKWKVCVPEDTNELHELSMEEYACNGRNRIPHTSFFSFLDKGAIKTGQSSPWMLCTVTQIEETKQMAKLIPISIFTIIPSTLGMHLFTLFVKQGMTLDNRVGHHFNISPGSLLSITIIFTLIWIPMYDRIFVPFIRRYTKNPRGITILQRIGIGLVFYIIILVIACLVERKRLRVAKENNLLGMHDTIPLTIFILLPQFALSGIGDNFVEIAKLEFFYDQAPESMKSLGTACATASYGLGGFLSTFFLSAVADITQRQGRKGWILDNINVSHLDYYYAFIAVISILNFICFLVVAKFFVYNDVKYTRPVLEMNATSSQDSGTSQPDAKY* 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1303 596 Gene3D MFS general substrate transporter like domains 7 573 IPR036259 -
Psa3g1303 596 PANTHER PROTEIN NRT1/ PTR FAMILY 5.2-LIKE 16 577 - -
Psa3g1303 596 SUPERFAMILY MFS general substrate transporter 23 563 IPR036259 -
Psa3g1303 596 Pfam POT family 102 531 IPR000109 GO:0016020|GO:0022857|GO:0055085
Psa3g1303 596 CDD MFS_NPF5 34 567 IPR044739 GO:0042937|GO:0042938|GO:0071916
Psa3g1303 596 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 16 577 IPR000109 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1303 Psa-Chr3 117635554 117638036 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1303 5 567 Organic Solute Cotransporters AT5G46040 59.187 0.0 668
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1303 - - gmx:100807002 854.744
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g1303 3 117635554 117638036 Psa3g1303 3 117635554 117638036 ECH
Psa3g1303 3 117635554 117638036 Psa6g2848 6 233409836 233413829 PCT