Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g2814 ATGGAAACTTCTGAATATTTTGAGAAATTCACATGGAGAATTGAAGATTTCTCCACAAAGAATGGCATGAAATTAAAATCCAAAGACTTCAAAATCCGCGGTTATACATGGAAGATCCTTGTTCATCCACTAAGGAAGGATGTTGATCATTTTACATTTTATTTAATGGTTGCTGATTCTTTACCACCATATGGATGGAATAGAGACACTTTTTTCAAGTTGGTTCTAATTAATCAACTTGATATGAACAAGTCCATTGTAAAAGAGACTCAACAAAAGTTCAATGGAGGATATAGATGTTGGGGCTCTTTTTTCATAAGACTCAAAGACTTCAATGATCATAAACAAGGGTATCTTGTTAGGGACACATGCATACTTGAAGCTCATATTTGTGTCTCCAATTTTACACCCAAAATTCATGACATCAATTCTTTGAACCCAAATTCTACCGATCAATCCTCCGATGTAAGGGAAACGGTTTGTCCAAGAATGTCAGGTTCTACTTCTAGTCCAAGAGCATCAGGTTCTACTTTTAGTCCAAGAACATCAAGTTCGGATTTAACAATTCGAGAATTTCTGGATTTGGAAAATTTAAAACCAGAAGAAAAATGTCTTATTCCTCTTTTAGATGAAATGTGCATGTGGCGTCCGTCTCTGATAGAGAATCTGATGAAAAAAACTCCTTTGTTTAGACAATGGACACTTATGTCGTTAGGTCAAATTTTGCATTTTCTTAAGACGAAGAAAGTGAAAGATATGAATGAAGATGATATTGAGAAAATTAAAAGTTTGTGGGAGGAACTCGCGAACTCGTCCGAATTAGACTTGAGTTGGTTAGAGCCTTATGTTCAATCTGCTTTAGGTGTGAAACCTTATATAGAAAGAGCTAAGAAGTTAAAGAAACTAAAGGATAAAGTTGTTGCTTTGGATATTAAAATGAAGCAGCTTAGAGATGAATTGACTGCTTCACAAGCACAATATGAGATTGCAAGGAAAGGCTTATCTGAAGTAAGAAATGGTTTTCAAGAAATGAATATTAATGCTCCAATAGGTTATACTATGTTATAG 1068 0.3446 METSEYFEKFTWRIEDFSTKNGMKLKSKDFKIRGYTWKILVHPLRKDVDHFTFYLMVADSLPPYGWNRDTFFKLVLINQLDMNKSIVKETQQKFNGGYRCWGSFFIRLKDFNDHKQGYLVRDTCILEAHICVSNFTPKIHDINSLNPNSTDQSSDVRETVCPRMSGSTSSPRASGSTFSPRTSSSDLTIREFLDLENLKPEEKCLIPLLDEMCMWRPSLIENLMKKTPLFRQWTLMSLGQILHFLKTKKVKDMNEDDIEKIKSLWEELANSSELDLSWLEPYVQSALGVKPYIERAKKLKKLKDKVVALDIKMKQLRDELTASQAQYEIARKGLSEVRNGFQEMNINAPIGYTML* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g2814 355 Coils Coil 299 333 - -
Psa6g2814 355 Pfam MATH domain 16 130 IPR002083 GO:0005515
Psa6g2814 355 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 6 337 - -
Psa6g2814 355 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 6 337 - -
Psa6g2814 355 ProSiteProfiles MATH/TRAF domain profile. 7 130 IPR002083 GO:0005515
Psa6g2814 355 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 7 146 IPR008974 GO:0005515
Psa6g2814 355 SUPERFAMILY TRAF domain-like 9 134 - -
Psa6g2814 355 MobiDBLite consensus disorder prediction 146 182 - -
Psa6g2814 355 SMART math_3 9 111 IPR002083 GO:0005515
Psa6g2814 355 CDD MATH 9 130 IPR002083 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g2814 Psa-Chr6 228559061 228561047 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g2814 - - gmx:100797919 438.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g2814 6 228559061 228561047 Psa3g0623 3 55651433 55652776 PCT