Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1877 ATGGACTCACACAAGCAACTTTTCATCCTCTTATGTCTATCTCTAGTTCTTGTACTTCTCTCAGGGCTGCAAGTTGAGGCCAGTCGTCACATCAAACATCATCCTTCAAAACAATTGTTTGTTTTTGGGGACTCATATGTTGACACCGGCAACACCCCAAAAAGTAAACCTGGTTCATGGAAACAACCATATGGCATTACCTTTCCCGGAAAACCAGCCGGAAGATTTTCCGATGGCAGAGTCTTAACTGACTTCATTGCCAAGTATTTGGGATTGAGATCACCAATTCCCCACAAATTCAGGAATGTTGTACCTAAGAATTATTTTAAGTATGGAATGAACTTTGCATATGGTGGTACAGGTGTATTTGATACATCCACTTCAGGTCCAAATGTGACTACTCAAATCAATTCCTTCAACCAACTTGTTCAAGAAAATGTTTATACTCAATCAGATATCACAAAATCTATTGCTTATGTATCTGTTGCTGGAAATGATTACAATCATTACTTGGCCACTAATGGCTCTATCCAGGGCTTTCCATCTTTCATTGCCTCAGTGGTTAAACAAACAGCTACCAATTTGGTTCAACTCCAAAAGTTAGGGTTTAAGAGAATTGTTGTTGGTGCTTTACAACCTCTTGGTTGTCTTCCTCAAACTACTGCTCAAAACTCATTCAAAAGTTGCAATAGTACATTTAATGATCTTGTAGTTCTCCATAACAACCTATTGGACCAATCTGTGACAAAGTTGAACCAAGAAGCCAACGGTTACACCACCTTTGTGATTCTAGATATTTTTGAGAGTTTCAGGTCGGTGTTGAATAACCCTTCAAGGCATAACATCAAGGAACGTTTGAAGCCATGTTGCTTTGGAGTTAGTAGTCAGTATAATTGTGGAAGTGTAGATGAGAATAATGTTAAGAAGTATTCGGTTTGTGAAAATCCGGAATCTACTTTCTTTTGGGATCGGTTGCACCCAACACAGGCTGGTTGGAATGCTGTCTATAATGAGTTGAAGATTAAAAGTCTTCATCAAATTCTATACTAG 1050 0.3857 MDSHKQLFILLCLSLVLVLLSGLQVEASRHIKHHPSKQLFVFGDSYVDTGNTPKSKPGSWKQPYGITFPGKPAGRFSDGRVLTDFIAKYLGLRSPIPHKFRNVVPKNYFKYGMNFAYGGTGVFDTSTSGPNVTTQINSFNQLVQENVYTQSDITKSIAYVSVAGNDYNHYLATNGSIQGFPSFIASVVKQTATNLVQLQKLGFKRIVVGALQPLGCLPQTTAQNSFKSCNSTFNDLVVLHNNLLDQSVTKLNQEANGYTTFVILDIFESFRSVLNNPSRHNIKERLKPCCFGVSSQYNCGSVDENNVKKYSVCENPESTFFWDRLHPTQAGWNAVYNELKIKSLHQILY* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1877 349 CDD SGNH_plant_lipase_like 39 339 IPR035669 -
Psa6g1877 349 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 1 348 - -
Psa6g1877 349 SUPERFAMILY SGNH hydrolase 35 339 - -
Psa6g1877 349 Pfam GDSL-like Lipase/Acylhydrolase 39 337 IPR001087 GO:0016788
Psa6g1877 349 Gene3D SGNH hydrolase 26 342 IPR036514 -
Psa6g1877 349 PANTHER OSJNBB0059K02.9 PROTEIN 1 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1877 Psa-Chr6 113846389 113848819 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g1877 39 330 Acyl Lipid Metabolism Gene Families AT4G10950 28.797 3.30e-27 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1877 - - gmx:100800932 465.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g0814 3 71614147 71617015 Psa6g1877 6 113846389 113848819 PCT