Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0814 ATGGATTTCTTTCCCTTTTTCCTCTCTTTCATTTTCATTATTCTACATCTCTTAGGACAAAGATTTGTACAAGGTGAGGTTGATATTCAACGTCACCACCATCATCATAAAGAGCCTATAACAAAATTGTTTGTGTTTGGAGATTCATATGCTGACACAGGAAACATCAAAAGAGGTTTTGCTCCTTCGTGGAAACATCCCTATGGTGTCACCTTTCCCGGCAAGCCCGCCGGTCGTTTCTCCGACGGCAGGATACTAGTGGATGAAATAGTGGGGTTCATATCTCTGCTGGCTTATGACATGTCTATCTATTCTGGTGTTACAATGTTGTTTCTTTTACAGAAAATGTATGTGATTATTTACCTTATGCATGCAATTGCAGCCAAGTATTTGAAAGTGAAATCACCAGCATCATACAGAATAAGAAAACATTTGGCACCACATCATTTGAAAAATGGGATGAGCTTTGCATTTGGTGGTACTGGTGTGTTTGAGACATTGAATCCAGGTCCAAACATGACAACTCAGATCAATTTTTTTCAAAAGGCAATACAAGACAAAGTATTCACAGCCTCAGATATTAGAAAATCAGTTGCTCTTGTTTCTGTAGCTGGTAATGACTACACTCGTTACACTGTCACAAATGGCTCTATTCAGGGTTTACCATCATTCATATTATCGGTGGTTAATCAAACAATCAGAAACGTGATTCGTATCAAAGAATTAGGAGTGAAAAAAGTGATTATATCAAATCTACAACCAGTTGGATGTCTACCTTCGGTAACAGCTTCATCTTCATTCAAAGAATGCAATGAAACATCCAACAATCTCCTCGTAGCTTACCATAACACCCTCTTAACCGAAGCTGTCACAAAGTTAAACCAACAACTCAACGATAATTCTTCATTACCCTTCATAGTTCTTGATCTATACGATAGTTTCATGTCGGTGTTGAAGCATCCATCCACACACAATATTAAGAACGAGTTGGAACCTTGTTGTGTTGGAGTGAGTAGTAAGTATTTTTGTGGAAGTGTTGTGGAGAAGGTTAAGAAATATACGGTTTGTGAGAATCCTAAATCTGCTTTCTTTTGGGATTTGGTTCATCCTACTGATGCAGGGTGGCGTGCTGTTTATACTAGGCTGAGAATAACCAATGCTTTTAAAGAGATTCATTACTAG 1182 0.3816 MDFFPFFLSFIFIILHLLGQRFVQGEVDIQRHHHHHKEPITKLFVFGDSYADTGNIKRGFAPSWKHPYGVTFPGKPAGRFSDGRILVDEIVGFISLLAYDMSIYSGVTMLFLLQKMYVIIYLMHAIAAKYLKVKSPASYRIRKHLAPHHLKNGMSFAFGGTGVFETLNPGPNMTTQINFFQKAIQDKVFTASDIRKSVALVSVAGNDYTRYTVTNGSIQGLPSFILSVVNQTIRNVIRIKELGVKKVIISNLQPVGCLPSVTASSSFKECNETSNNLLVAYHNTLLTEAVTKLNQQLNDNSSLPFIVLDLYDSFMSVLKHPSTHNIKNELEPCCVGVSSKYFCGSVVEKVKKYTVCENPKSAFFWDLVHPTDAGWRAVYTRLRITNAFKEIHY* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0814 393 Pfam GDSL-like Lipase/Acylhydrolase 43 378 IPR001087 GO:0016788
Psa3g0814 393 SUPERFAMILY SGNH hydrolase 43 381 - -
Psa3g0814 393 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 7 94 - -
Psa3g0814 393 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 127 393 - -
Psa3g0814 393 PANTHER OSJNBB0059K02.9 PROTEIN 7 94 - -
Psa3g0814 393 PANTHER OSJNBB0059K02.9 PROTEIN 127 393 - -
Psa3g0814 393 Gene3D SGNH hydrolase 28 386 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0814 Psa-Chr3 71614147 71617015 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0814 40 373 Acyl Lipid Metabolism Gene Families AT4G10950 24.302 2.81e-18 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0814 - - vun:114165063 439.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g0814 3 71614147 71617015 Psa6g1877 6 113846389 113848819 PCT