Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1777 ATGGCTTCAAACCAACCAAGACATGTTGAAGAAATTCACAAAACAATAGAGACTGATTTAAGTCCTACTGCAACCCAACAACAACATGTTGAGGAGAAGCCTGGCGTGATTGGTTCGGTGGTGCAGACTGTGAAAAACACCTTAGAGAATGCAAAAGAAGCTGTAATTGGCAAGGGAAGCCCCACAGCTACAACACAAGAAGTCCATGTTTACGACGACGACAAAGATTTAGTTTCGGGTGGTGAAGTTAGGGATATATCAGCCAACAAGTCTCGTGGAGTCTATGATTCTGCTGCTGAGAAAGCCAAGGAGTGCAAGGACACAACAGGTTCCAAAGCTGGCGAGTACACAGATGCAGCAGCTCAAAAAGCAAAGGAAACAAAAGATGCAGCAGCTCAGAAGGCGAAGGAAACAAAAGATGCAGCAGCTCAGAAGGCGAAGGAAACAAAGGACGCAACAAAAGATAAGACTAATGAGTATGCAGATTGTGCAGCTCAGAAGGCGAAGGAAACGAAGGAGGCGGCAAAAGAGAAGACTAATGAGTATGCAGATTATGCAGGGGAAAAAGCAAAAGAAGCTAAGGATAAAGCTGTGGAGTACAAAGACTGTGCTGCAGAGAAGGCAAAGGAAGGGAAAGATGCTACATTGAATAAGCTGGGTGAGTATAAGGACTACGCAGCTGAGAAGGCGAAAGAAGGGAAAGACACTGCTGCCGATGCAGCCAATAAGGCTATGGGTTACTTGGGTGACAAGAAAGAGGAAACTAAGCAGAAGGCAGCCGAGACTGCTGAGGCTGCTAAACAGAAAACAGCCGAGACTGCTGAGGCTGCTAAACAGAAAACAGCAGAGGCAAAAGACAAGACCAAGGAAAAGCTGAGTGAAGCAGATGAAGAGGCAAGGAGGAAAATGGAAGGGGGGAATGTTGGAGATACAGGTTTCAGAGAGGAAACCTGGAGGCGTGGAAATGAGGGTGTGATCAGAACTGAAGACACGCGAACGGGAGCGGTGGCGGATAGGCTGAAGGCGGCGGATCAGATGACGGGTCAGACATTCAATGATGTTGGAGCCTTGGATGATGAAGGAGTTACTCGTGTGGGACTCCTTGACATTAAGAAAAAGTGA 1122 0.4706 MASNQPRHVEEIHKTIETDLSPTATQQQHVEEKPGVIGSVVQTVKNTLENAKEAVIGKGSPTATTQEVHVYDDDKDLVSGGEVRDISANKSRGVYDSAAEKAKECKDTTGSKAGEYTDAAAQKAKETKDAAAQKAKETKDAAAQKAKETKDATKDKTNEYADCAAQKAKETKEAAKEKTNEYADYAGEKAKEAKDKAVEYKDCAAEKAKEGKDATLNKLGEYKDYAAEKAKEGKDTAADAANKAMGYLGDKKEETKQKAAETAEAAKQKTAETAEAAKQKTAEAKDKTKEKLSEADEEARRKMEGGNVGDTGFREETWRRGNEGVIRTEDTRTGAVADRLKAADQMTGQTFNDVGALDDEGVTRVGLLDIKKK* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1777 373 Coils Coil 161 188 - -
Psa6g1777 373 Coils Coil 252 298 - -
Psa6g1777 373 PANTHER DAUER UP-REGULATED-RELATED 25 280 - -
Psa6g1777 373 PANTHER DAUER UP-REGULATED-RELATED 282 365 - -
Psa6g1777 373 Coils Coil 121 152 - -
Psa6g1777 373 Pfam Late embryogenesis abundant protein 201 243 IPR004238 -
Psa6g1777 373 Pfam Late embryogenesis abundant protein 96 138 IPR004238 -
Psa6g1777 373 Pfam Late embryogenesis abundant protein 117 160 IPR004238 -
Psa6g1777 373 Pfam Late embryogenesis abundant protein 161 199 IPR004238 -
Psa6g1777 373 Pfam Late embryogenesis abundant protein 252 295 IPR004238 -
Psa6g1777 373 MobiDBLite consensus disorder prediction 119 160 - -
Psa6g1777 373 MobiDBLite consensus disorder prediction 271 331 - -
Psa6g1777 373 MobiDBLite consensus disorder prediction 96 111 - -
Psa6g1777 373 MobiDBLite consensus disorder prediction 247 265 - -
Psa6g1777 373 MobiDBLite consensus disorder prediction 247 331 - -
Psa6g1777 373 PANTHER EMBRYOGENESIS ABUNDANT PROTEIN, PUTATIVE-RELATED 282 365 - -
Psa6g1777 373 PANTHER EMBRYOGENESIS ABUNDANT PROTEIN, PUTATIVE-RELATED 25 280 - -
Psa6g1777 373 MobiDBLite consensus disorder prediction 91 160 - -
Psa6g1777 373 Gene3D Helix hairpin bin 151 242 - -
Psa6g1777 373 Gene3D - 81 146 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1777 - - aprc:113873399 248.054
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g0877 3 82393726 82395289 Psa6g1777 6 103276443 103277908 PCT