Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1762 ATGCCTTCCAGTCACTTGCTTCTCGAGGAACCCATTAGGATGGCTTCTATCTTGGAGCCATCTAAAGCCAGCTTTTTTTCTGCGATGACAAAGATTGTTGGGACATTGGGTCCTAAATCTCGATCTGTTGAGACTATTTCTGGCTGTCTTAAAGCTGGGATGTCTGTGGCTCGTTTTGACTTTTCATGGTGTGATCCTGAGTATCACCAGGAAACTTTGGAGAATTTGAAGACTGCTATTAAGAGTACTAAGAAGCTCTGTGCTGTTATGCTGGACACAGTTGGTGCGGAGATGCAGGTTGTTAACAAAAGTGAGACAACTATCACACTTGAGATAGATGGTCAGGTTGTTCTAACTCCAGACCAGGGACAAGAAGCTTCTTCAGAGATTTTGCCAATCAACTTTGATGGACTGGCTCAGGCAGTGAAGACGGGAGACACTATTTTTATCGGTCAATACTTGTTCACAGGAAGTGAAACTACTTCTGTATGGCTAGAGGTATCTGAAGTCAAAGGCAATGATGTTGTATGTATTATAAAGAACTCAGCTACATTGACAGGGTCATTGTTCACTTTGCATGCTTCTCAGATTCATATTGATTTACCTACTCTTACAGAAAAAGACAAGGAGGTTATAAGCACATGGGGGGTTAAAAACAAAATCGATTTTCTGTCATTGTCATATACTCGACATGCTCAAGATGTCCGCGAGGCTCGTGAATTCCTTTCCAAGTTAGGCGATCTTAGCCAGACTCAAATCTTTGCCAAAATTGAAAATGTTGAGGGATTGACCCATTTTGATGAGATTTTGCAAGAAGCTGATGGTATTATCCTTTCCCGTGGGAATCTGGGTATTGATCTTCCACCAGAGAAGGTTTTTCTATTTCAAAAATCTGCTCTACAGAAGTGTAATATGGCCGGGAAGCCTGCTGTGCTTACACGTGTTGTGGACAGCATGACTGACAACTTACGACCAACTCGTGCTGAAGCCACTGACGTTGCCAATGCTGTTTTAGATGGAAGTGATGCAATTCTTCTCGGTGCCGAGACTTTACGTGGATTGTACCCCGTGGAGACTATTTCTACCGTTGGCAGAATTTGTTCAGAGGCCGAGAAAGTTTTCAATCAAGATGTTTATTTTAAAAAGACGGTCAAACATGTTGGAGAACCCATGACCCACTTGGAATCTATTGCATCCTCTGCGGTTCGTGCTGCTATTAAGGTGAAAGCTTCTATAATAATTTGCTTCACTTCATCTGGAAGGGCTGCAAGGTTGATTGCAAAATATAGGCCAACAATGCCGGTTCTCTCTGTGGTGATCCCCCGACTTAAGACAAATCAGCTTAAGTGGAGCTTTAGTGGAGCTTTTGAGGCAAGGCAATCACTTATTGTAAGAGGTCTCTTTCCTATGCTTGCTGATCCTCGACATCCTGCTGAGTCAACAAGTGCATCAAATGAATCTATTCTTAAGGTTGCCCTTGATCATGGAAAAGCATTGGGAGTCATAAAGTCACATGACCGAGTTGTTGTTTGTCAGAAACTTGGTGATGCATCGGTGGTTAAGATTATCGAGCTCGAAGATTAA 1584 0.4261 MPSSHLLLEEPIRMASILEPSKASFFSAMTKIVGTLGPKSRSVETISGCLKAGMSVARFDFSWCDPEYHQETLENLKTAIKSTKKLCAVMLDTVGAEMQVVNKSETTITLEIDGQVVLTPDQGQEASSEILPINFDGLAQAVKTGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVVCIIKNSATLTGSLFTLHASQIHIDLPTLTEKDKEVISTWGVKNKIDFLSLSYTRHAQDVREAREFLSKLGDLSQTQIFAKIENVEGLTHFDEILQEADGIILSRGNLGIDLPPEKVFLFQKSALQKCNMAGKPAVLTRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISTVGRICSEAEKVFNQDVYFKKTVKHVGEPMTHLESIASSAVRAAIKVKASIIICFTSSGRAARLIAKYRPTMPVLSVVIPRLKTNQLKWSFSGAFEARQSLIVRGLFPMLADPRHPAESTSASNESILKVALDHGKALGVIKSHDRVVVCQKLGDASVVKIIELED* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1762 527 Gene3D - 96 202 IPR015806 GO:0004743|GO:0006096
Psa6g1762 527 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 8 376 IPR015813 GO:0003824
Psa6g1762 527 Gene3D - 30 370 IPR040442 -
Psa6g1762 527 TIGRFAM pyruv_kin: pyruvate kinase 30 517 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Psa6g1762 527 PANTHER PYRUVATE KINASE 3 527 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Psa6g1762 527 SUPERFAMILY PK C-terminal domain-like 358 515 IPR036918 -
Psa6g1762 527 SUPERFAMILY PK beta-barrel domain-like 103 186 IPR011037 -
Psa6g1762 527 Gene3D - 371 513 IPR036918 -
Psa6g1762 527 PRINTS Pyruvate kinase family signature 85 101 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Psa6g1762 527 PRINTS Pyruvate kinase family signature 221 235 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Psa6g1762 527 PRINTS Pyruvate kinase family signature 253 279 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Psa6g1762 527 PRINTS Pyruvate kinase family signature 280 304 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Psa6g1762 527 PRINTS Pyruvate kinase family signature 329 347 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Psa6g1762 527 PRINTS Pyruvate kinase family signature 348 364 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Psa6g1762 527 Pfam Pyruvate kinase, alpha/beta domain 395 522 IPR015795 -
Psa6g1762 527 Pfam Pyruvate kinase, barrel domain 30 376 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Psa6g1762 527 PANTHER PYRUVATE KINASE 3 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1762 Psa-Chr6 102621135 102625098 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1762 K00873 - gmx:100802271 979.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g1762 6 102621135 102625098 Psa6g1762 6 102621135 102625098 ECH
Psa3g0855 3 77452247 77458602 Psa6g1762 6 102621135 102625098 PCT