LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Psa3g0855	ATGCATTCCAGTCACTTGCTTATCGAAGAACCGATTCGGATGATCTCAATACTCGAGCCATCCAAATACAGCTTTTTTCCTGCAATGACGAAGATTGTTGGTACCCTGGGACCTAAATCTCGTTCCGTCGATGTTATTTCTTCTTGCCTCAAAGCTGGAATGTCTGTGGCTCGATTTGATTTCTCTTGGGGTGATGCTGAATATCACCAGGAGACTTTGGAAAATTTGAAGACTTCTATCAAATCTACTAAGAAGCTCTGTGCTGTTATGTTGGACACAGTGGGTGCTGAAATGCAGGTTGTTAACAAAAAGGAGACGGCAATTTCGCTCCAGGCTGATAATCAGGTTGTTCTAACTCCTGATCAGGGACAAGAAGCTTCTTCAGAGATACTGCCTATCAATTTTGATGGACTGGCCAAGTCAGTCAAGGCGGGAGACACCATTTTCGTTGGTCAATACTTGTTCACAGGAAGTGAAACTACTTCTGTTTGGCTAGAGGTAGCGGAAGTTACAGGGCTGAATGTTGTTTGTACTATAAAAAATTCAGCAACATTAGCTGGGGCATTGTTTACCTTGCATGCATCTCAAATTCATATTGATTTACCTACCCTCACTGAGAAAGACAAGGAGGTTATAAGCACCTGGGGAGTAAAAAACAAAATTGATTTTCTATCATTGTCATATACTAGGCATGCTGAAGATGTTCGCCAGGCACGTGAATTCCTTTCTACATTAGGTGATCTCAGCCAAACTCAAATTTTTGCAAAGATTGAAAATGTTGAGGGATTGACCCATTTTGATGAGATTCTACAAGAAGCAGATGGTATTATCCTTTCCCGTGGGAATTTGGGCATTGATCTTCCACCAGAGAAGGTATTTTACTTCCAAAAGTCCGCCCTTTACAAGTGTAATATGGCTGGGAAGCCTGCTGTGCTCACACGTGTTGTGGATAGCATGACCGACAACTTGAGACCAACTCGTGCGGAAGCCACAGATGTTGCCAATGCTGTTTTAGATGGTAGTGATGCAATTCTTTTGGGTGCTGAGACTTTACGTGGGTTATACCCTGTTGAGACTATTTCTACAGTTGGCAAGATTTGTGCAGAAGCTGAGAAAGTTTTCAATCAAGACCTTTATTTTAAAAGGACAGTGAAACATGTTGGTGAACCCATGACCCATTTGGAATCCATAGCATCCTCAGCGGTACGTGCAGCTATTAAGGTGAAGGCTTCTGTTATCATTTGCTTCACTTCATCTGGAAGGGCTGCAAGATTGATAGCAAAGTACAGGCCAACGATGCCGGTTCTCTCCGTTGTGATACCCAGACTTAAGACAAATCAGCTAAAATGGAGCTTTAGTGGAGCTTTTGAGGACCAACTACCAATACATTTGTGGGAAAGCTTATTTACTTCTAATGTACTACTATGCTACTCCCTCCACCCCTAA	1446	0.4246	MHSSHLLIEEPIRMISILEPSKYSFFPAMTKIVGTLGPKSRSVDVISSCLKAGMSVARFDFSWGDAEYHQETLENLKTSIKSTKKLCAVMLDTVGAEMQVVNKKETAISLQADNQVVLTPDQGQEASSEILPINFDGLAKSVKAGDTIFVGQYLFTGSETTSVWLEVAEVTGLNVVCTIKNSATLAGALFTLHASQIHIDLPTLTEKDKEVISTWGVKNKIDFLSLSYTRHAEDVRQAREFLSTLGDLSQTQIFAKIENVEGLTHFDEILQEADGIILSRGNLGIDLPPEKVFYFQKSALYKCNMAGKPAVLTRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISTVGKICAEAEKVFNQDLYFKRTVKHVGEPMTHLESIASSAVRAAIKVKASVIICFTSSGRAARLIAKYRPTMPVLSVVIPRLKTNQLKWSFSGAFEDQLPIHLWESLFTSNVLLCYSLHP*	482

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Psa3g0855	481	Pfam	Pyruvate kinase, barrel domain	30	375	IPR015793	GO:0000287\|GO:0004743\|GO:0006096\|GO:0030955
	Psa3g0855	481	SUPERFAMILY	PK beta-barrel domain-like	98	186	IPR011037	-
	Psa3g0855	481	TIGRFAM	pyruv_kin: pyruvate kinase	30	440	IPR001697	GO:0000287\|GO:0004743\|GO:0006096\|GO:0030955
	Psa3g0855	481	PRINTS	Pyruvate kinase family signature	85	101	IPR001697	GO:0000287\|GO:0004743\|GO:0006096\|GO:0030955
	Psa3g0855	481	PRINTS	Pyruvate kinase family signature	221	235	IPR001697	GO:0000287\|GO:0004743\|GO:0006096\|GO:0030955
	Psa3g0855	481	PRINTS	Pyruvate kinase family signature	253	279	IPR001697	GO:0000287\|GO:0004743\|GO:0006096\|GO:0030955
	Psa3g0855	481	PRINTS	Pyruvate kinase family signature	280	304	IPR001697	GO:0000287\|GO:0004743\|GO:0006096\|GO:0030955
	Psa3g0855	481	PRINTS	Pyruvate kinase family signature	329	347	IPR001697	GO:0000287\|GO:0004743\|GO:0006096\|GO:0030955
	Psa3g0855	481	PRINTS	Pyruvate kinase family signature	348	364	IPR001697	GO:0000287\|GO:0004743\|GO:0006096\|GO:0030955
	Psa3g0855	481	SUPERFAMILY	Phosphoenolpyruvate/pyruvate domain	6	375	IPR015813	GO:0003824
	Psa3g0855	481	PANTHER	PYRUVATE KINASE	2	455	IPR001697	GO:0000287\|GO:0004743\|GO:0006096\|GO:0030955
	Psa3g0855	481	PANTHER	PYRUVATE KINASE	2	455	-	-
	Psa3g0855	481	Gene3D	-	30	370	IPR040442	-
	Psa3g0855	481	SUPERFAMILY	PK C-terminal domain-like	358	444	IPR036918	-
	Psa3g0855	481	Pfam	Pyruvate kinase, alpha/beta domain	395	459	IPR015795	-
	Psa3g0855	481	Gene3D	-	96	202	IPR015806	GO:0004743\|GO:0006096
	Psa3g0855	481	Gene3D	-	371	442	IPR036918	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Psa3g0855	Psa-Chr3	77452247	77458602	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Psa3g0855	K00873		-	gmx:100781158	864.374

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Psa3g0855	3	77452247	77458602	Psa3g0855	3	77452247	77458602	ECH
	Psa3g0855	3	77452247	77458602	Psa6g1762	6	102621135	102625098	PCT