Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1416 ATGTTCTCCAAAACCAAAATCAACACTCTCTTCCACTACTACCTCAACAACAATCTCAACATTCACATTCACACTCACACAAGATCAATATCCAGTCTCAAAGTAGTATGGCGCAAAGACCCATCCCTAGACCAAGCCATAGAACACGATAAACGCTACAAACAATGCGCACGCGTCGTCAAAGAAGTCCTCAACGAACCAGGTCAAGTAATCCCTCTCCGCTACCTCGAAAAACGCCGCCAAAGGATGCGACTCAAGGTAAAAATCGATACTTTTTTGAACCAAAACCCTTTTCTATTCGATGTCTACTACGATCGCATTAAACCCAAAACAGAACCTGTGAAATTCATTCGGGTCAGCGATCGTCTTCTTCGGTTTATCGAGGAAGAAAAACGGATTTTTAAGGAGAATGAACCGTTAATTGTTGCTAAGTTGTGTAAATTGTTGATGATGTCGAAGAATAAGGTTGTTAGTGCTGATAAATTGCTTCATGTGAAGAGGGAATTTGGTTTCCCTAATGATTTTTTGGTTGATTTGGTTCCGAGGTATCCGGAGTATTTTAGGTTAACTGGTTTACCTGGGGAGGGAAAATCGTTTCTTGAATTGGTTGATTGGAATCCGGAGTTTGCGAAATCTGTTATTGAGGAAAGGGCTGAAGAGGAAAGTAGGGTTACTGGGATTAGGGTTAGGCCTAATTTCAATGTAAAGCTTCCTCCGGGGTTTGTGTTGAAGAAAGAGATGAGGGAGTGGATTAGGGATTGGATGGAGCTTGATTATGTTTCGCCTTATGAGGATGTCTCGAATTTGGAGCAAGCTTCTAGAGAGATGGAGAAGAGGTCTGTTGGGATTTTCCATGAATTGCTTTCTCTTTCGTTGTATAAGAGGATTCCGGTGCCGATTCTTGGAAAGTTTTGTGAGGAGTATAGGTTTTCGAATGCGTTTTCAAGTGCTTTTACGAGGCATTCGGGTATATTCTATATGTCGTTGAAAGGTGGGATTGAGACTGCAATGTTGAGAGAAGCATATGAAGGGGATAAGTTGATTGACATTGATCCATTGCTTCAGATAAAAGATAGATTTGCTGAGGTGTTGGAGGAGGGTTGGCGCGAAAGAGTGGAGCAGTTGAGGTTGAAACAAGAGAAAATTAAGCAAGATATGGAACTTGTGGCCACAAGAGTTTCTGAATAA 1188 0.4158 MFSKTKINTLFHYYLNNNLNIHIHTHTRSISSLKVVWRKDPSLDQAIEHDKRYKQCARVVKEVLNEPGQVIPLRYLEKRRQRMRLKVKIDTFLNQNPFLFDVYYDRIKPKTEPVKFIRVSDRLLRFIEEEKRIFKENEPLIVAKLCKLLMMSKNKVVSADKLLHVKREFGFPNDFLVDLVPRYPEYFRLTGLPGEGKSFLELVDWNPEFAKSVIEERAEEESRVTGIRVRPNFNVKLPPGFVLKKEMREWIRDWMELDYVSPYEDVSNLEQASREMEKRSVGIFHELLSLSLYKRIPVPILGKFCEEYRFSNAFSSAFTRHSGIFYMSLKGGIETAMLREAYEGDKLIDIDPLLQIKDRFAEVLEEGWRERVEQLRLKQEKIKQDMELVATRVSE* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1416 395 Pfam Plant organelle RNA recognition domain 39 368 IPR021099 GO:0003723
Psa6g1416 395 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 15 390 IPR045040 GO:0003723
Psa6g1416 395 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE FAMILY PROTEIN 15 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1416 Psa-Chr6 68809579 68810766 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1416 - - lang:109336290 653.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g1416 6 68809579 68810766 Psa6g1416 6 68809579 68810766 ECH
Psa3g0611 3 54874579 54877334 Psa6g1416 6 68809579 68810766 PCT