Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0611 ATGATGAATAAATTCAAAAATGCGGTGCTTCCATGGATGAAGCTTCAATTCCAACATCGTGGCATTGCAAAAGTACGTCTAAAATGGGTGAAAAATCGAAGCATCGATCACATCATCGACAAAGAAACCGATCTCAAAGCCGCTTCACTTCTCAAAGACGCAATCAAACGTTCCTCCACCGGCTTCCTCACAGCCAAAACCTTCGCCGATTGGCAAAAGCTTCTCGGCCTAACCGTCCCCGTTCTCCGATTCATGCGCAGGTATCCAACTCTCTTTCACGAATTCCCTCACCCTCGCTGGAACTCTCTTCCTTGTTTCCGTTTAACCGAAACCGCACAGCTTTTAGATTCTCAAGAACAGAATATTTACACTGTTCACGAAAACGACACCGTTGAGAGACTCTCTAGGTTACTCATGATGATGAAAACTCGTACCGTTCCTCTTCAGTCTCTTTATCCTCTCAAATTTGATTTAGGTTTCCCTGATTCGTTTGAGAAAACCCTAATTCCGAAATATCCTGAGAGATTCCAGTTTGTTAAGGCTCCTAATGGTGTTTCCGCAGTAAGACTCGTGCAGTGGTGCGATGAATTTGCGGTTTCGGCTTTGCAGAAGAGTAATGAGTGTGAGAGTGATCAGTATAGAGACTTTAAGAGAGGGAAAACAGCGTTGGTTTTTCCGATGAGGTTTCCGAGAGGCTACGGTGGACAGAAGAAGGTTAGGTTTTGGATGGATGAGTTTCAGAAATTGCCTTATATTTCGCCGTATACTGATTCTTCTAAGATTGATCCTAAAAGTGATTTGATGGAGAAGCGCGTTGTTGGGGTTTTGCATGAGATTTTGAGTTTGTGTTTGCATAAGAAAACTAAGAGGAACTACTTGAGAAGTTTGAGGGAGGAGTTGAATCTTCCTCATAAGTTTACTAGGATTTTTACTAGATATCCTGGGATATTTTATCTTTCGTTGAAGTGTAAAACAACCACTGTTACTCTTAGAGAAGGGTATGCAAGGGGAAAGTTGGTGGATCCGCATCCACTTGCTCGCCATAGAGATAAGTTTTACCACGTGATGAGGACAGGGCTTCTTTATCGTGGTGATGGGTCCTTGAAAGTTGGGGAAGATGCTTTGATGGTTGATTCTATGGAGAATGATGAAATGGGAGACGGGGATTCTGAGGAGGAAGAGGTTGAAACAAGTGATGAATTCTGCGAGGATGAAGTTTCGGACTCGGATGATAGTAGTAGTGAGTAA 1248 0.4303 MMNKFKNAVLPWMKLQFQHRGIAKVRLKWVKNRSIDHIIDKETDLKAASLLKDAIKRSSTGFLTAKTFADWQKLLGLTVPVLRFMRRYPTLFHEFPHPRWNSLPCFRLTETAQLLDSQEQNIYTVHENDTVERLSRLLMMMKTRTVPLQSLYPLKFDLGFPDSFEKTLIPKYPERFQFVKAPNGVSAVRLVQWCDEFAVSALQKSNECESDQYRDFKRGKTALVFPMRFPRGYGGQKKVRFWMDEFQKLPYISPYTDSSKIDPKSDLMEKRVVGVLHEILSLCLHKKTKRNYLRSLREELNLPHKFTRIFTRYPGIFYLSLKCKTTTVTLREGYARGKLVDPHPLARHRDKFYHVMRTGLLYRGDGSLKVGEDALMVDSMENDEMGDGDSEEEEVETSDEFCEDEVSDSDDSSSE* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0611 415 Pfam Plant organelle RNA recognition domain 30 359 IPR021099 GO:0003723
Psa3g0611 415 MobiDBLite consensus disorder prediction 378 415 - -
Psa3g0611 415 PANTHER OS04G0546100 PROTEIN 16 411 - -
Psa3g0611 415 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 16 411 IPR045040 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0611 Psa-Chr3 54874579 54877334 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0611 - - gmx:100808403 582.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g0611 3 54874579 54877334 Psa6g1416 6 68809579 68810766 PCT