Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1386 ATGGCATTTAAAGGGTTTGTCTTGTGTCTAGTTATGGTCCTAGTAGCGGCCAACATGATGACTCAAAATGCAGCACAATCAGGTTGTACTACAACACTCACTACCTTGAGCCCTTGTCTAAACTACATAATGGGGAGCTCTTCAGCCCCATCAAGTTCATGTTGCTCACAGCTTTCAACTGTAGTCCAATCTTCTCCGCAGTGTCTATGCTCTTTGTTTAATGGCGGTGGTTCATCTTTTGGAATCACCATAAATCAAACTCTTGCTTTGTCTCTCCCTGCTGCTTGTAAAGTTCAAACTCCACCTGTTAGCCAGTGCAACATCTCCTTCAAGTTCATCTTCTCCGGTGGCCTCTCCCGTTGGTTCTCCAACTGA 375 0.4507 MAFKGFVLCLVMVLVAANMMTQNAAQSGCTTTLTTLSPCLNYIMGSSSAPSSSCCSQLSTVVQSSPQCLCSLFNGGGSSFGITINQTLALSLPAACKVQTPPVSQCNISFKFIFSGGLSRWFSN* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1386 124 PRINTS Plant phospholipid transfer protein signature 28 44 IPR000528 GO:0006869|GO:0008289
Psa6g1386 124 PRINTS Plant phospholipid transfer protein signature 49 63 IPR000528 GO:0006869|GO:0008289
Psa6g1386 124 PRINTS Plant phospholipid transfer protein signature 83 100 IPR000528 GO:0006869|GO:0008289
Psa6g1386 124 Gene3D - 26 106 IPR036312 -
Psa6g1386 124 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 6 108 IPR043325 -
Psa6g1386 124 CDD AAI_LTSS 36 98 - -
Psa6g1386 124 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN 6 108 - -
Psa6g1386 124 SMART aai_6 29 106 IPR016140 -
Psa6g1386 124 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 28 111 IPR036312 -
Psa6g1386 124 Pfam Probable lipid transfer 11 106 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1386 Psa-Chr6 67036825 67037964 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g1386 5 107 Lipid Metabolism Gene Families AT3G22600 58.252 5.36e-36 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1386 - - mtr:MTR_1g071730 161.384
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g1386 6 67036825 67037964 Psa6g1386 6 67036825 67037964 ECH
Psa6g1386 6 67036825 67037964 Psa3g1466 3 133849713 133852549 PCT