Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1466 ATGGCTAGATTCCCAGGACCTTGTCATCTACCCAAGGATAGTTCTCAGCGTCACAAGGAAGTTCTAGAGTTGGTGGTGCTTTTCTCATTGTATATATTTTCACCATACCCTCAATATGACTCAAATCTTAAGGACAAATCAAAATGCAAAGCAAAAAAGATAAGAACCACAAGAGTGTCTCTTTGGGGTGTGACAGTGGCACAAACTGACTCAAGTTGCACTAATGTGTTCATAAGTCTTTCTCCATGTCTTGAATACATCACAGAACAAACTTCCTCTCCTTCCGGAGGTTGCTGCTCACAGCTTGCTTCTGTTATGGGGTCACAACCACAGTGTCTATGCGAGGTTGTTAACGGCGGTGCTGCTTCATCTATTGCTGCTAGTTTTAACATCAATCAAACTCGCGCTTTAGCACTTCCAGCAACTTGTAATGTCCAAACACCTCCTATCAACACTTGCACCGGTTCAGCTTCTTCTTCTTCTCCTCCTGTGGGAATTTCTGTTTCCAACATTCCGAATTCTTCTTCAGGGAGTTTTTCATCAACTACTGGAAGTAGTGAAAGTATTCGTGGCTCATCGTCGTCTTATAGAACGTCATCAAGTTCTGGAAAATTACAATGTTCTTTGCTTGTTCTGGTTATCTTTGCAAAGTTCACATTCATATTGATGACCACTACTTAG 681 0.417 MARFPGPCHLPKDSSQRHKEVLELVVLFSLYIFSPYPQYDSNLKDKSKCKAKKIRTTRVSLWGVTVAQTDSSCTNVFISLSPCLEYITEQTSSPSGGCCSQLASVMGSQPQCLCEVVNGGAASSIAASFNINQTRALALPATCNVQTPPINTCTGSASSSSPPVGISVSNIPNSSSGSFSSTTGSSESIRGSSSSYRTSSSSGKLQCSLLVLVIFAKFTFILMTTT* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1466 226 SMART aai_6 73 153 IPR016140 -
Psa3g1466 226 PRINTS Plant phospholipid transfer protein signature 72 88 IPR000528 GO:0006869|GO:0008289
Psa3g1466 226 PRINTS Plant phospholipid transfer protein signature 93 107 IPR000528 GO:0006869|GO:0008289
Psa3g1466 226 PRINTS Plant phospholipid transfer protein signature 130 147 IPR000528 GO:0006869|GO:0008289
Psa3g1466 226 Pfam Probable lipid transfer 67 153 IPR016140 -
Psa3g1466 226 Gene3D - 70 151 IPR036312 -
Psa3g1466 226 PANTHER LIPID TRANSFER PROTEIN 59 223 - -
Psa3g1466 226 CDD AAI_LTSS 80 145 - -
Psa3g1466 226 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 59 223 IPR043325 -
Psa3g1466 226 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 72 154 IPR036312 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1466 56 153 Lipid Metabolism Gene Families AT3G22600 48.980 5.52e-27 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1466 - - cam:101512493 170.244
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g1466 3 133849713 133852549 Psa3g1466 3 133849713 133852549 ECH
Psa6g1386 6 67036825 67037964 Psa3g1466 3 133849713 133852549 PCT