Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1374 ATGGAACCAAAGTTCAGAATCAACTGTAACAGAAATAACAATGACTACCTTCCAACAACAAACAATGGCACTACTCGTTTGCCAGAAAGTCCAAGAATACCAATGGAGTTTCTCTCAAGATCATGGAGTGCTTCTGCATTTGAAGTCTCTAAAGCCTTGTCACCTCAACCACCACCTCCTTCTTCTACTTGCTTACCTTCCAATAAACCTTCTACTATCTCTATACCTGAAGAAACCATATCTGGAAATCAATTCTCTTTTGCTACCTCTGCTACTTCACAGCTTGTCCTTGAACGCATCATGTCACAGTCTACAAGAGAGGAAGTATCTCCATTAACATCAGGTAGATTGTCTCATAGCAGTGAACCATTGAATGGTGGTGGTTCTTTAACAGGAACAGATAGTCCTCCAATTTCTCCTTCTGATGAATTTGACGATGTTATTAAGTTTTTTCGTGCAAACAATTCGATACATGCTTTATTCAATGGTACAAGAGCCATGAGTAGTGGAATTGGCAATGCAACACCTAGTTCAGGACCAAAAACAGTAGGAAGATGGTTGAAAGAAAGAAGAGAAAAAAAGAAAGAAGAAAACAGAAGCCATAATGCTCAAGTTCATGCTGCTATTTCGGTAGCAGCAGTAGCTTCTGCCGTTGCTGCCATCACAGCAGCAACGGCAGCATCGTCTGCGTCAAACAAGGATGAGAGAATGGTCAAGACTGATATGGCTGTGGCTTCTGCAGCAACACTGATTGCTGCTCAGTGTGTGGAAGCTGCTGAAGCAATGGGAGCTGAGAGAGAACACCTTGCTTCTGTTGTTAGTTCTGCTGTCAATGTGAGATCTCATGATGATATCACTACTCTAACCGCTGCAGCTGCCACAGCTCTAAGGGGTGCAGCAACATTGAAAGCAAGAGCATTGAAAGAGATGTGGAGTATTAATGCCGTGACACCGTTAGAGAAAAGCATAGGAATTGGAATATGCGGCGGTAAAGCCAATAATAACAGTAGTTCTAGCACTAGTGATAGTGGTGGAGAGATTGTCAATGCAGATAATTTTCTAAGTGCTTGCAGCCAAGAGCTTCTGGCTCGAGGAACCGAATTACTCAAACGCACTCGTAAAGGTGATCTTCACTGGAAAGTAGTTTCTGTTTATATACATCGAACCGGCCAGGTGATGTTGAAAATGAAAAGCAGACATGTTGCAGGAACAATTACAAAAAAGAAAAAGAATGTTGTGTTAGATGTGTGCATGACTTTAGCAGCATGGTCAGGGAGGCATCTATTAGAGGATGGTGAAAAAAGAAGGTACTTTGGATTGAAGACAGAATCAAGAGGTTTAGTTGAGTTTGAATGTAGAAATCAAAGAGAATATGAATTGTGGACTCAAGGTGTTTCAAGACTTCTTTCAATTGTTTCACATAGGAAAAACAGAATCTAA 1440 0.4118 MEPKFRINCNRNNNDYLPTTNNGTTRLPESPRIPMEFLSRSWSASAFEVSKALSPQPPPPSSTCLPSNKPSTISIPEETISGNQFSFATSATSQLVLERIMSQSTREEVSPLTSGRLSHSSEPLNGGGSLTGTDSPPISPSDEFDDVIKFFRANNSIHALFNGTRAMSSGIGNATPSSGPKTVGRWLKERREKKKEENRSHNAQVHAAISVAAVASAVAAITAATAASSASNKDERMVKTDMAVASAATLIAAQCVEAAEAMGAEREHLASVVSSAVNVRSHDDITTLTAAAATALRGAATLKARALKEMWSINAVTPLEKSIGIGICGGKANNNSSSSTSDSGGEIVNADNFLSACSQELLARGTELLKRTRKGDLHWKVVSVYIHRTGQVMLKMKSRHVAGTITKKKKNVVLDVCMTLAAWSGRHLLEDGEKRRYFGLKTESRGLVEFECRNQREYELWTQGVSRLLSIVSHRKNRI* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1374 479 PANTHER AUXIN CANALIZATION PROTEIN 1 478 - -
Psa6g1374 479 PANTHER EXPRESSED PROTEIN 1 478 IPR040269 -
Psa6g1374 479 Pfam Auxin canalisation 28 321 IPR008546 -
Psa6g1374 479 Pfam Plant pleckstrin homology-like region 367 472 IPR013666 -
Psa6g1374 479 MobiDBLite consensus disorder prediction 105 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1374 Psa-Chr6 64699924 64703545 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1374 - - gmx:100782024 645.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g1374 6 64699924 64703545 Psa6g1374 6 64699924 64703545 ECH
Psa3g1450 3 132779029 132780953 Psa6g1374 6 64699924 64703545 PCT