Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1450 ATGGAACCAATTAATTGTCAGCAGCATGAATTTGTTCCAAGTGGCGGCGGCCACCGCACCCCTTTGCCGGAGAGCCCTCGAGTTCCTATGGAGTTTCTGTCGAGGTCATGGAGTGCTTCAGCTCTTGAAGTCACAAAAGCTATTGCACCAGCTCATTCTCAACCACCTTTTTCATCATGCATGCCTTCAAATGGTTCTGGTTCTATTCCTGAAGAAACTAGTATCTACTCTATCTCTGAGGAGCTCTCAACTATGTCTAAGAATCAGTTTTCTTTCGCTTCTTCTGCTACTTCACAGCTTGTCCTTGAACGCATTATGTCACACTCTGCTAGAGAGGAAGTGTCACCGTTAACATCAGGTAGATTATCTCACAGCAGTGAGCCTTTGAATGGTAATGGTTCATTGACAGGAACAGACAGTCCACCAGTTTCTCATTCAGATGAATTTGACGATGTTGTTAAGTTTTTTCGGGCGAACAATTCCATTCATCCATTATTCAATGGTGGAAGAGCAAACGGGGCCATTGGCAACGTCACAGCCGGTTCAGGACCTAAAACTGTAGGAAGATGGTTGAAAGAGAGAAGAGAAAAGAAGAAAGAAGAAAACAGAACACATAATGCTCAGATGCATGCTACTATTACTGTGGCTGCTGTTGCTGCTGCTATAGCAGCCATTGCGGCTGCAACAGCTGCCTCATCGACACCAAACAAGGACGAGAAGATGGCCAAGACTGACGTGGCTGTTGCTTCCGCTGCCACGTTAGTTGCTGCACAATGTGTGGAGGCTGCTGAAGCAATGGGAGCTGAGCGCGACCACCTTGCTTCGGTGGTCAGCTCAGCCGTGAACGTCCGTTCTCATGATGATATATCTACTCTTACCGCTGCAGCCGCCACAGCTCTCCGAGGAGCGGCGACATTAAAAGCTAGAGCTCAGAAGGATGTATGGAATATTGCTGCAGTAACACCACTGGAGAAAGGAATAGGGGGCATAACAATAAGTGGAAAAGGGAACAACATAAAAAACAGCAACAGCAGCACCAGTGACAGTGGAGAAATTATAAATGCAGATAATTTCACAGGTTCCAGCATCCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAACGCACTCGTAACGGCGATCTCCATTGGAAAATAGTTTCTGTTTACATACATCGAACAGGACAGGTAAAGCTAAAAATGAAGAGCAAACTTGTTGCAGGAAAAATCACAAAAAAGAACAAGAATGTTGTGCTAGATGTGTGCACGGATTTACCAGCATGGCCAGGAAGAGACATTTTAGAAGATGGAGAAAAACGACACTACTTCGGATTGAAAACAGACACTAGAGGAATCGTCGAGTTCGAGTGTAGAACTCGAAAAGAATATGATATCTGGACACAAGGAGTTTCTAGGCTTCTCTCAATCGTCACGCAACGACAAAACAAATACAACAATTGA 1461 0.4504 MEPINCQQHEFVPSGGGHRTPLPESPRVPMEFLSRSWSASALEVTKAIAPAHSQPPFSSCMPSNGSGSIPEETSIYSISEELSTMSKNQFSFASSATSQLVLERIMSHSAREEVSPLTSGRLSHSSEPLNGNGSLTGTDSPPVSHSDEFDDVVKFFRANNSIHPLFNGGRANGAIGNVTAGSGPKTVGRWLKERREKKKEENRTHNAQMHATITVAAVAAAIAAIAAATAASSTPNKDEKMAKTDVAVASAATLVAAQCVEAAEAMGAERDHLASVVSSAVNVRSHDDISTLTAAAATALRGAATLKARAQKDVWNIAAVTPLEKGIGGITISGKGNNIKNSNSSTSDSGEIINADNFTGSSIQELLAKGSELLKRTRNGDLHWKIVSVYIHRTGQVKLKMKSKLVAGKITKKNKNVVLDVCTDLPAWPGRDILEDGEKRHYFGLKTDTRGIVEFECRTRKEYDIWTQGVSRLLSIVTQRQNKYNN* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1450 486 Pfam Auxin canalisation 23 326 IPR008546 -
Psa3g1450 486 PANTHER AUXIN CANALIZATION PROTEIN 1 485 - -
Psa3g1450 486 MobiDBLite consensus disorder prediction 112 143 - -
Psa3g1450 486 Pfam Plant pleckstrin homology-like region 372 477 IPR013666 -
Psa3g1450 486 MobiDBLite consensus disorder prediction 111 144 - -
Psa3g1450 486 MobiDBLite consensus disorder prediction 1 22 - -
Psa3g1450 486 PANTHER EXPRESSED PROTEIN 1 485 IPR040269 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1450 Psa-Chr3 132779029 132780953 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1450 - - mtr:MTR_7g095500 676.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g1450 3 132779029 132780953 Psa3g1450 3 132779029 132780953 ECH
Psa3g1450 3 132779029 132780953 Psa6g1374 6 64699924 64703545 PCT