Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1334 ATGAAGCAAATTCGTCAACGCCAAAGGATCATTATTCTCTCTCTCCTCTCTCTTTCCGTTGTTGCTCCCCTCATTTTCCTCGGGAGAAGAGAGTTTCTTCAAGATTTGTATCGTGTTACATCCAGAACAGACAGTTCGAAGTTAAATGTTGTAGAACAGATTCAGGGAGGTGCTGAAGAATTTAAAGAGCAAAATCTAGTTGGTTATAAAGAAAAAAATGTTGTTTCAACAATTAGTTACGATTCAGAAAAGAATAATGATGCTGAAGAATCTAGAATTGCAGCATTGGAAAGAAATGTTTCAGGATTCAGCCATGACGAAAGACAAGACGGGGATGCTCGGAAAAAAGATTCATCCTCCGCGGATGAAAATATAAATGTACATGCTGTTCCGTATAGAATGTCAAAGGAGAATATTACACTGACAAATAGGCCATCACGTCGACAAGAAGACCGCCATCATATTTTAAATCCTCCCTCTCGTGAAGTGAAAAATCAGAAGGTTCAAGAGATTAAGGATCAAATTTTAATGGCTAAAGTATACTTGAAGTTTGCGCCGCCAAGCAGCAACTCACACTTGAAGGAGCTGGAGCTGCGAATGAAAGAGATGGAACGAGGAGTAGAAGGAGTCACCCGGGATTTAGATTTGTCAAGGAGTGTTTTGCAGGCAATGAGACACATGGAAGCCTCACTATCTATTGTCAGCCGTGCTTTCTCAGACTGCTCTATGGTTTCTAAGCTTCAAGCAGTGAAGCGCAAAACTGAAGAGCAAGTTCGTTTTCAGAGAAGCCAAGCAACATATCTTGTTCATCTTGCTGTAAGGACTGCCCAGAAAAACTTTCACTGTCTTTCTATGAGGCTGACTGCTGAATATTTTTCCCTGAGACCTGAGGAGAGACAGCTTCCAAATGAAAATAAGATTCATCTTCCAGATCTTTATCATTATGCTGTCTTCTCCGACAATGTTCTGGCATGTGCAGTTGTTGTAAACTCTACTGTCTCTACTACCAGGGAACCAGATAAACTTGTTTTCCATATAGTGACCGATTCACTAAACTTGCCAGCGATCTCAATGTGGTTCTTTTTAAACCCTCCTGGCAAAGCCACGGTCCATGTACAGAGCACAGAAAACTTTGAATGGTTGTCCAAATACAATACCTTCGGTAAAAATAATAACAGCGATCCAAGATACACATCTGAATTGATCTACTTGCTTTTCTACCTGCCAGACATTTTCCCTACCCTGAATAACATTGTGATCTTTGATCATGATGTGGTGGTTCAACAAGATCTCAGTGGACTATGGAATGCCAATATGAAGGGAAATGTTATTGGAGCAGTTGGAACTTGTCAGGAAGGAAAAACCCCATTTCATAGGATTGATGCATTTGTAAACTTCTCAGATCCACTAATTAGAGAGAGTTTTGATGACAATTCTTGCACATGGGCGTTTGGGATGAATTTTTTTGATTTGCAACAATGGAGGAGACATAATTTAACGGCTGTTTATCACAAATATTCACAAATGGGTTCTGAGAAGCCATTGTGGAATCGGAACAATGGACGTCTTCCATTAGGTTGGCTCACCTTCTATAACAAGACGGAGATGTTGGACAGACAATGGCACGTTCTTGGCCTTGGTCATAACTCAGGCGTCGATCGAAATGAGATTGAGCAAGCTGCCGTTATACACTATGATGGTATTAGGAAGCCATGGTTAGATATTGCAATGGGCAGATATAAAAGTTATTGGACCAAATTTTTGAATTTTGACCACCCTTTTCTGCAACAGTGCAATCTTCAGGCGTAG 1809 0.4057 MKQIRQRQRIIILSLLSLSVVAPLIFLGRREFLQDLYRVTSRTDSSKLNVVEQIQGGAEEFKEQNLVGYKEKNVVSTISYDSEKNNDAEESRIAALERNVSGFSHDERQDGDARKKDSSSADENINVHAVPYRMSKENITLTNRPSRRQEDRHHILNPPSREVKNQKVQEIKDQILMAKVYLKFAPPSSNSHLKELELRMKEMERGVEGVTRDLDLSRSVLQAMRHMEASLSIVSRAFSDCSMVSKLQAVKRKTEEQVRFQRSQATYLVHLAVRTAQKNFHCLSMRLTAEYFSLRPEERQLPNENKIHLPDLYHYAVFSDNVLACAVVVNSTVSTTREPDKLVFHIVTDSLNLPAISMWFFLNPPGKATVHVQSTENFEWLSKYNTFGKNNNSDPRYTSELIYLLFYLPDIFPTLNNIVIFDHDVVVQQDLSGLWNANMKGNVIGAVGTCQEGKTPFHRIDAFVNFSDPLIRESFDDNSCTWAFGMNFFDLQQWRRHNLTAVYHKYSQMGSEKPLWNRNNGRLPLGWLTFYNKTEMLDRQWHVLGLGHNSGVDRNEIEQAAVIHYDGIRKPWLDIAMGRYKSYWTKFLNFDHPFLQQCNLQA* 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1334 602 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 1 601 IPR029993 GO:0047262
Psa6g1334 602 Pfam Glycosyl transferase family 8 282 576 IPR002495 GO:0016757
Psa6g1334 602 Coils Coil 193 213 - -
Psa6g1334 602 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 315 592 IPR029044 -
Psa6g1334 602 PANTHER HEXOSYLTRANSFERASE 1 601 - -
Psa6g1334 602 MobiDBLite consensus disorder prediction 99 127 - -
Psa6g1334 602 SUPERFAMILY Nucleotide-diphospho-sugar transferases 313 599 IPR029044 -
Psa6g1334 602 MobiDBLite consensus disorder prediction 101 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1334 Psa-Chr6 60338968 60343563 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g1334 1 602 Glycosyltransferase AT1G06780 45.714 0.0 533
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1334 K13648 - gmx:100819088 774.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g1334 6 60338968 60343563 Psa6g1334 6 60338968 60343563 ECH
Psa3g1405 3 126286171 126296953 Psa6g1334 6 60338968 60343563 PCT