Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1405 ATGAAGCAATCTCATCAGTGGCAGAGGACTTTGCTCCTCTGTCTCCTCTCTCTCTCCGTCGTCGCTCCGGTCATTTTCGTCTCTCGCAGGCTTCAAGTTCTAACACGCGATGGTCGGAGAGAGTTTCTTGATGATTTATCCAGTGTTAATAGCGATGATTTGGAAAAAAATAATGATTATGAGGACTCGGAAGAATTAGACGAGCCAGAGCAAGTTGTTTATAAAGAAAATGATTTTGGTTCCAAGAATAGCGACAATACAGAAAAAAATAATGATTCTGAGGACTCAAGAATTGAGGGGTCCCGAAATAATTACTTGGAAAAAAAAGAATTCGACCATGATGATGAAACACAAGACCAGGAAGGACAGCAGAAAGGATTGTCCTCCACAGATGGAGATCAGGAAGACTCGGAAGAATTAGAAGCGGCAAAGCAAGTTGGTTATAAAGAAAATGATTTTGGTTCCACGGTTAGAGACCCTTCGGAAAAAAATATTGATCCTGTGGAGTCTAGAATTGAGGGGTCCAGAAATAATTTTTTGGAAAAGAAAGAATTCGACCATGATGAAACAAAAGACCAGGAAGCTCAGTGGAAAGGATTATACTCCACGGGTGGAGATCAGAAGAAATTTAATACAACAGTTATGGACAATCAGAATATACAAACTCCCTTTCAAAGAAAGAAAGTTGAGAATATTATTAAAGTTACTGAAAAGCAATCTGGTTTGACAGTAAGCCAACATCGTTATATTTCACGCCATCGGTCTCGCAAAGTGACAAATCAGACAGTTTTGGAGATTAAGGATCAAATTATCAGAGCCAGAGCATACTTGGGATTTTTTCCACCAAGCAGCACCTCACACTTGGTGAAGGAGTTAAGGATGAGAATTAAAGAGTTGGAACGTGCTGTTGGAGAAGCTACCAAAGATTCAGATCTTTCAAGGAGTGCTTTGCAGAAAATGAGACACATGGAGGGTTCACTGTCTAAAGCCAACCGAGCTTTCCCAGACTGCTCTGCTATGGCTGCTAAGCTCCATGCGATGAATGATAACGCTGAAGAACAAGTTCGTTCTCATCAACACGAAGTAACCCATCTTGTTCATCTTGCTGCTAGGACCACCTCTAAAGGTCTTCACTGTCTTTCTATGCAACTAACTGCTGATTACTTTTCCCTGAGGCCTGAGGATAGAAAGCTGCCAAATGAAAATAAGATTCATGATCCGGAACTTTATCATTATGCTGTCTTCTCTGACAATGTTCTGGCATGTGGAGTGGTTGTTAACTCAACTGTGTCTAATTCCAAGGAACAGGAAAAACTTGTTTTACATATAGTGACCAATTCACTCAACTTTCCTTCAATCTCAATGTGGTTCTTATTAAACCCTCCTGGGAAAGCCGTCATCCACATACAGAACATAGACAATTTTGAGTGGTTGTCCAAGTACAGTACATTCAAGAAACAAAATTCCAGTGATCCAAGATATACTTCTGAATTGAACTACCTCCGTTTCTACTTGCCAGATATCTTCCCCACTCTAGATAAGATTCTGCTCTTTGATCATGATGTGGTGGTGCAACAAGATCTCAGCACACTATGGAATATTGACATGAATGAAAAAGTAATCGCAGGAGTTGGGACTTGCCAGGAAGGTGAAACTTCATTTCGTAGGATGGATATGTTCATAAACTTCTCAAATCCATACATTGCAAAGAGGTTTGATGTCAATGCTTGTACATGGGCATTTGGGATGAACTTGTTTGATTTGCAGCAGTGGAGGAGGCATAATTTAACTGGTGTCTATCACAAATATTTGCAAAAGGGTTCCAACATGCCATTGTTTAGCGCCGGCAGTCTGCCATTAGGCTGGCTCACCTTCTATAACAAAACTATGGTTTTGGGCAGACGGTGGCATATTGTTGGCCTTGGTTATGACTCGGTCGTTGACACAAATAAGATTGAGCAAGCTGCTGTTATCCACTTTGATGGAATTAGGAAGCCATGGATGGATATTGGGTTGGCAAGATACAAGAGTTATTGGTCCAAATATATCAAGTTTGACCTCCCTCTTTTGCAACGTTGCAATATTCAGGCGTAG 2094 0.4078 MKQSHQWQRTLLLCLLSLSVVAPVIFVSRRLQVLTRDGRREFLDDLSSVNSDDLEKNNDYEDSEELDEPEQVVYKENDFGSKNSDNTEKNNDSEDSRIEGSRNNYLEKKEFDHDDETQDQEGQQKGLSSTDGDQEDSEELEAAKQVGYKENDFGSTVRDPSEKNIDPVESRIEGSRNNFLEKKEFDHDETKDQEAQWKGLYSTGGDQKKFNTTVMDNQNIQTPFQRKKVENIIKVTEKQSGLTVSQHRYISRHRSRKVTNQTVLEIKDQIIRARAYLGFFPPSSTSHLVKELRMRIKELERAVGEATKDSDLSRSALQKMRHMEGSLSKANRAFPDCSAMAAKLHAMNDNAEEQVRSHQHEVTHLVHLAARTTSKGLHCLSMQLTADYFSLRPEDRKLPNENKIHDPELYHYAVFSDNVLACGVVVNSTVSNSKEQEKLVLHIVTNSLNFPSISMWFLLNPPGKAVIHIQNIDNFEWLSKYSTFKKQNSSDPRYTSELNYLRFYLPDIFPTLDKILLFDHDVVVQQDLSTLWNIDMNEKVIAGVGTCQEGETSFRRMDMFINFSNPYIAKRFDVNACTWAFGMNLFDLQQWRRHNLTGVYHKYLQKGSNMPLFSAGSLPLGWLTFYNKTMVLGRRWHIVGLGYDSVVDTNKIEQAAVIHFDGIRKPWMDIGLARYKSYWSKYIKFDLPLLQRCNIQA* 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1405 697 MobiDBLite consensus disorder prediction 52 196 - -
Psa3g1405 697 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 129 696 IPR029993 GO:0047262
Psa3g1405 697 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 1 127 IPR029993 GO:0047262
Psa3g1405 697 Coils Coil 341 361 - -
Psa3g1405 697 MobiDBLite consensus disorder prediction 155 195 - -
Psa3g1405 697 PANTHER HEXOSYLTRANSFERASE 1 127 - -
Psa3g1405 697 PANTHER HEXOSYLTRANSFERASE 129 696 - -
Psa3g1405 697 Coils Coil 289 309 - -
Psa3g1405 697 SUPERFAMILY Nucleotide-diphospho-sugar transferases 410 695 IPR029044 -
Psa3g1405 697 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 412 686 IPR029044 -
Psa3g1405 697 MobiDBLite consensus disorder prediction 70 121 - -
Psa3g1405 697 Pfam Glycosyl transferase family 8 379 670 IPR002495 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1405 Psa-Chr3 126286171 126296953 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1405 1 94 Glycosyltransferase AT1G06780 38.053 6.56e-13 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1405 K13648 - gmx:100811619 862.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g1405 3 126286171 126296953 Psa3g1405 3 126286171 126296953 ECH
Psa3g1405 3 126286171 126296953 Psa6g1334 6 60338968 60343563 PCT