Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0935 ATGGCGGACGATAGCTCTAATTTCGACGCGGCCGCTGCTACCGATTCGTCCAAACCGCCTTCGTCGTCGTGTATTAGAATAGGTGACCGTCAACTCTTCCATGTTGAGCTCCGACCAGGCGAGACCACCATTGTATCGTGGAAGAAACTTCTCAAGGACGCCTATAAGGCCAACGATGGATCCACTTCCGCGGCTCCGGAGCAAGTTCCCAAAGCAAACCCCGCGCTTGAAGCTCGAATCGCTCCTGGACAAGCTGAGAATAATGAACAAGATGCTCCCCAGACAAACCGGTTCAGCGCTGTAATAGAGAAGATTGAACGGCTTTACATGGGTAAGGATAGTGACGATGAGGATCTACCCGTTGTTCCTGATGATCAGTATGATACAGAAGACTCTTTCATTGATGATGCTGAACTGGATGAATATTTTGAGGTTGACGATTCTGTAATCAAACATGACGGTTTCTTCATAAACAGGGGAAAATTGGAACGCATAAATGAACCTCCGGCATTACCTAATCAGCCAGCAAAGAAAAGGTGCAGAAAAGATATATTGAAGAATCCAGGTGAAAACATTGATGGGCGTGTATCAAATAAGCATGTAAAAGTGGGCAAGACAGCTGCTGGAAAGACTGCGCCATTATCTGTGAAGAATACATTTACTTCCTCGCAGAATTTGGCTGTACCTGGTAAACATTATGAAGACTTGAAATCTCAAAATCAATTGGAGGTCTCCAGAACTACTTTGAAAAAGGAACCGGCTGATATTAGACCAATTTTAGGTCCTTCTGCCTCTTTGAAAGTATCAAATAATGATGTCTCTTCTGTGGTAGAAGCCAAAGATGCTGATAAACAGAAGACAATACTTCAGTCTAAGAACAGAGTGGACAAATATAAAGATGCAAGTGGAGTGCATGATACTCCTCATCAGAAGTACCAAGAAAAAAAAGTTTCTACACCTTCCAAATCCCAACTTGGAAGAATCCCAAGTAGTATTGATGATTTAGAAAATACTGGTCGATCCAAAGATAAAAATGGCATCAATGAACTGCCAGATCTAAACTTGTCTGAGGGAAAATCTGTGATGCAAGCACCAAAATCTAAAAACATGCTCAAAAAAGCTGGCTCCAGTGTGAGGTCAAAATCTACAATTCTTGAGAAAGCTATTCAAGATTTGGAGAAAACGGTTGCAGAGTCAAGGCCACCAACTACGGAAAACCAGGAGGTTGATAGCACATCCCAAGCTATCAAACGGAGATTACCGAGGGAAATAAAGCTAAAACTTGCTAAAGTTGCTAGATTAGCGCAGGCAAGCCAAGGGAAAGTATCACAGGAGGTTGTTAACCGTCTTATGAGTATTCTTGGGCATCTGATTCAGCTCAGAACACTTAAGAGAAACTTAAAAATTATGATCAATATGGGTTTGTCTGCAAAGAAGGAGAAAGATGATAGGTTTCAACAAAAAAAGAAGGAAGTTGTTGAGATGATAAAGATGCAGGCCCCATCTATTGAATCTGAGCAACAGCAGCAAGCTGGAGCATCTGGTGGCCAAGAATTGGGTCCTGATGGAAAAGCAATATCTAAAAGGAATTTTACTATGGACACTGCATTGGAAGACAAGATTTGTGATCTCTATGACCTTTTTGTTGATGGATTGGATGAAACTGCAGGTCATCTAATCAGAAAGTTGTATGCTGAGCTAGCAGAGCTATGGCCAAATGGTTGCATGGATAACCATGGGATTAAACGTGCAATTTGCAGAGCAAAAGAGAGACGCAGAGCATTACACAGTAGAAATAAGGATCAGGAAAAAATGAAAAGGAAAAGCCTATTGGCATCTCAGCCTGAGGAGAATGTTCAATTTGGTGCCAGTCCGCAACAGAACATGCGAAAGAGATTAGCTCCAGAATCTAGCAGTCATACTTCATTGAATAAGGCAGTTTCTAATACAGTTACAGATGTCCGGGTTCTCCACTCCCCTGTGAATGGTCTGAAAAAAGAAAAATCAAAGGCAAGTTCAAGCTCTTCCCCGGATGATGTTTTAATTAAAAAGGTAAAGAAGAGAAAGACAGAATGTGAGTTGGAAGGAACTCATCGTCGCCCTGAGAAGCTGTTTTCTGTGAAGCAAGAAGAAAGGCCTAGGTCCCAAAAGCAGTCTGCAGTTGCTCCCCTCAAATCAAACCTTCAGCCAACATCTTTACCCAGTGTTGAACAGTCAAGCTAA 2223 0.4215 MADDSSNFDAAAATDSSKPPSSSCIRIGDRQLFHVELRPGETTIVSWKKLLKDAYKANDGSTSAAPEQVPKANPALEARIAPGQAENNEQDAPQTNRFSAVIEKIERLYMGKDSDDEDLPVVPDDQYDTEDSFIDDAELDEYFEVDDSVIKHDGFFINRGKLERINEPPALPNQPAKKRCRKDILKNPGENIDGRVSNKHVKVGKTAAGKTAPLSVKNTFTSSQNLAVPGKHYEDLKSQNQLEVSRTTLKKEPADIRPILGPSASLKVSNNDVSSVVEAKDADKQKTILQSKNRVDKYKDASGVHDTPHQKYQEKKVSTPSKSQLGRIPSSIDDLENTGRSKDKNGINELPDLNLSEGKSVMQAPKSKNMLKKAGSSVRSKSTILEKAIQDLEKTVAESRPPTTENQEVDSTSQAIKRRLPREIKLKLAKVARLAQASQGKVSQEVVNRLMSILGHLIQLRTLKRNLKIMINMGLSAKKEKDDRFQQKKKEVVEMIKMQAPSIESEQQQQAGASGGQELGPDGKAISKRNFTMDTALEDKICDLYDLFVDGLDETAGHLIRKLYAELAELWPNGCMDNHGIKRAICRAKERRRALHSRNKDQEKMKRKSLLASQPEENVQFGASPQQNMRKRLAPESSSHTSLNKAVSNTVTDVRVLHSPVNGLKKEKSKASSSSSPDDVLIKKVKKRKTECELEGTHRRPEKLFSVKQEERPRSQKQSAVAPLKSNLQPTSLPSVEQSS* 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0935 740 MobiDBLite consensus disorder prediction 595 611 - -
Psa6g0935 740 MobiDBLite consensus disorder prediction 285 377 - -
Psa6g0935 740 MobiDBLite consensus disorder prediction 285 316 - -
Psa6g0935 740 MobiDBLite consensus disorder prediction 719 740 - -
Psa6g0935 740 MobiDBLite consensus disorder prediction 317 335 - -
Psa6g0935 740 PANTHER WOUND-RESPONSIVE FAMILY PROTEIN 20 740 - -
Psa6g0935 740 MobiDBLite consensus disorder prediction 1 23 - -
Psa6g0935 740 MobiDBLite consensus disorder prediction 501 522 - -
Psa6g0935 740 MobiDBLite consensus disorder prediction 501 515 - -
Psa6g0935 740 MobiDBLite consensus disorder prediction 680 715 - -
Psa6g0935 740 PANTHER CAPZ-INTERACTING PROTEIN AND RELATED PROTEINS 20 740 - -
Psa6g0935 740 MobiDBLite consensus disorder prediction 592 740 - -
Psa6g0935 740 MobiDBLite consensus disorder prediction 613 656 - -
Psa6g0935 740 Pfam HPC2 and ubinuclein domain 124 163 IPR014840 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0935 Psa-Chr6 35276177 35290564 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0935 - - mtr:MTR_1g029680 1008.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g0935 6 35276177 35290564 Psa6g0935 6 35276177 35290564 ECH
Psa6g0935 6 35276177 35290564 Psa5g1980 5 153167512 153171371 PCT