Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1980 ATGAACGATGAGAAGAAGCCTTCATCGTCGTTCGTGAAAATAGGCGACCGGCAATTGTTTACGGTGGAGCTCCGGCCGGGAGAGACCACCATAGTATCATGGAAGAAGCTGTTGAAAGACGCCGCCAAGTCGAACGGATCCGCTTCCACATCTCAACACTCCCGGCCGGAGGCTTTTCCGGGGCAACCTGTTGAGGTTGAGGAAAATGATGAAGCTCAGCCACACCGTTTCAGTGCTGTGATAGAGAAGATTGAACGCCTTTACATGGGTAAGGATAGCAGTGATGATGAGGATCTGCCTGATGTTCCTGATGATGATCAGTATGATACTGAAGATTCTTTTATAGACGACGCTGAGCTGGATGAATATTTTCAGGTTGATCATTCCAAAGTCAAACATGACGGATTCTTTGTAAATAGGGGGAAATTGGAACGCACTGATGAACCTCCTGTAATACCCAACCAACAACCAAAGAAAAGGCGCAGAAAAGATATAGTGAAGAATCCAGGTGAAAATATTAATGACCATGGATCAAATAAACATATAAAAGTGGGCAAGGCAGCATCTGGGAAAACAACTTCCCTACAGGCAAGGAATGTGTGTAATTCCTCACAGAATTTGGCTGTACCCAATGAAGACTATGAAGACTTGAAAATTCATAATCAATCAGATATCTATGGAGTTAGTTCCAAAAAGAAAATTGCTGATACTAAACCCATATTAGTCTCTGCTGTCTCTTTGAAAACATCGAGTGATGATGTCCCTGCTGCCATGTCAGAAGTCAAAGATGCTGATAAGAAGATAGGAACTTTTCAATCTAAGAACACAAGTGAATCATTTGACATATCTCATCAAAAGTACCATGAGAAAGGTGCTTATGTACAATCCAAATCCCAACCTGGAAGACCCTCGAAGAGTATTGATAATTTAGAAAATAGCGGTCGGTTGAAAGAAAGAAATGGTATGCGTCAACTTCCGGATCTTAACCTGTCTGTGGGAAAGTCTGCTACTAAAGCAGTCAAATCTGAATACACTGCGCACAGGAAAGAGCGTAGCTAG 1059 0.4249 MNDEKKPSSSFVKIGDRQLFTVELRPGETTIVSWKKLLKDAAKSNGSASTSQHSRPEAFPGQPVEVEENDEAQPHRFSAVIEKIERLYMGKDSSDDEDLPDVPDDDQYDTEDSFIDDAELDEYFQVDHSKVKHDGFFVNRGKLERTDEPPVIPNQQPKKRRRKDIVKNPGENINDHGSNKHIKVGKAASGKTTSLQARNVCNSSQNLAVPNEDYEDLKIHNQSDIYGVSSKKKIADTKPILVSAVSLKTSSDDVPAAMSEVKDADKKIGTFQSKNTSESFDISHQKYHEKGAYVQSKSQPGRPSKSIDNLENSGRLKERNGMRQLPDLNLSVGKSATKAVKSEYTAHRKERS* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1980 352 MobiDBLite consensus disorder prediction 154 182 - -
Psa5g1980 352 Pfam HPC2 and ubinuclein domain 102 144 IPR014840 -
Psa5g1980 352 PANTHER CAPZ-INTERACTING PROTEIN AND RELATED PROTEINS 1 351 - -
Psa5g1980 352 MobiDBLite consensus disorder prediction 42 75 - -
Psa5g1980 352 MobiDBLite consensus disorder prediction 43 57 - -
Psa5g1980 352 MobiDBLite consensus disorder prediction 293 334 - -
Psa5g1980 352 MobiDBLite consensus disorder prediction 88 108 - -
Psa5g1980 352 PANTHER WOUND-RESPONSIVE FAMILY PROTEIN 1 351 - -
Psa5g1980 352 MobiDBLite consensus disorder prediction 142 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1980 Psa-Chr5 153167512 153171371 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1980 - - gmx:100793966 468.388
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g0935 6 35276177 35290564 Psa5g1980 5 153167512 153171371 PCT