Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0843 ATGGGAAATGTAAGCAATGAAGAACAAGAACTCGGAGAGACAGAGAATTTGGAGAGAGAAGACGTAGAAAAAGCTGGAGTTGATTTAGAAGATGCAAGTGGAATAGCACCATGGACACAACAGATCACAGTTAGAGGACTGATAACTAGCGTCATTATTGGCTTGATTTATAGCGTCATTGTGTTGAAACTGAATCTCACAACTGGTTTAGTCCCTAATCTTAATGTTTCAGTTGCACTTCTTGGTTTTGTGTTCATTAAAGTTTGGACTAAGATTCTTGAGAAAGCAAATATTGTTTCAAAACCTTTCACTAGACAGGAGAATACCATTATTCAGACTTGTGCTGTTGCATGCTACAGTGCTTCTTATGGAGGTGGTTTTGGATCTTACCTCTTGGGTTTGAATCGGAAGACATACGAGCGAGTCGGAGGGGCTAGTACACCGGGGAATACTTCTGACACCAAGGAGCCTGGAATTGGCTGGATGACTGGCTTTCTCCTTGTTACTTACTTTGTTGGGCTAACAGCATTGATTCCTTTTCGAAAGATGATGATAATAGATGCTAAATTACCTTATCCAACTGGAAATGCTACAGCTGTTCTTATTAATGGATTCCATACTCCTAAAGGAAATGTCATGGCCAAGAAGCAGGTTAAGGGTTTCATGCGGTTCTTTTCGTTCAGTTTGCTTTGGTCTTTCTTCCAATGGTTCTATACTGGTGGAGACCAATGCGGATTCGCTCAGTTTCCTACTTTCGGGTTGAAAGCATGGAAAAACACATTTTACTTTGATTTCAGCATGACTTATGTTGGAACAGGAATGATTTGTTCACATCTTATCAATTTATCATTGCTTTTTGGAGCTGTTTTTATTTCCATTGCATTAATCCTTGGTGACGGACTCTACAATTTTATCAAAGTTATATATTTTAGTACCTTAAATTTTCAAGCCTGCATGAAAAGGAGGAATCAAATAACATGTTCAGTTACAGATTATAACCGGAACAAAACTCCAGACGATCTTACCCGCGATGAATTCTTTATAAAAGAAAGTGTTCCAATATGGTTAGCATGTGCAGGGTATGTAGTACTCACCTTAATCTCCATCAATGTTATCCCTTTAATATTCCATCAAGTGAAGTGGTACTTTGTGGTGATAGCTTATCTCCTAGCACCGATTCTTGGCTTCTGCAATGCTTATGGTACTGGCTTAACTGACATGAACATGGCTTATAATTATGGGAAAGTAGCACTTTTCGTTCTTGCAGCTTTAGGAGGGAAAAGTGATGGTGCTGTTGCTGGACTTGTAGCATGTGGAATAATAAAATCATTTGCTTCAACTTCATCTGATTTAATGCAAGATATGAAGACCGGTCATTTAACTTTAACTTCGCCGAGGTCAATGCTTGTAACACAAGCAATTGGTACAGCAATAGGTTGTGTTATTGCACCACTCACATTCTTTCTTTTCTACCATTCGTTTGATCTTGGAAACCCTAATGGTGAATACAAAGCACCATATGCTATCATCTTTAGAAACATGGCAATTCTTGGTGTTGAAGGCTTTTCAGCACTACCAAACCATTGCTTGAAATTCTGTTATGGGTTTTTTGCATTTGCTGTGTTGGTTAACTTTATAAGAGATTGGAACCCTAAGAATATTGGGAAATGGGTCCCACTTCCTATGGCAATGGCTGTTCCTTTTGTTGTTGGTGCTTACTTTGCGGTTGACATGTGTGTGGGAAGTTTAGTTGTGTTTGTTTGGAGTAAATTGAAAAGAAAGGAAGCAAATTTGATGGTTCCGGCTGTTGCTTCTGGTTTGATTTGTGGAGATGGGATATGGGTTCTTCCTTCAACTGTTCTTGCTTTGTTTAAGGTTCGTCCACCAATTTGTATGAGCTTTGTTGTAAATAAGTAG 1917 0.3881 MGNVSNEEQELGETENLEREDVEKAGVDLEDASGIAPWTQQITVRGLITSVIIGLIYSVIVLKLNLTTGLVPNLNVSVALLGFVFIKVWTKILEKANIVSKPFTRQENTIIQTCAVACYSASYGGGFGSYLLGLNRKTYERVGGASTPGNTSDTKEPGIGWMTGFLLVTYFVGLTALIPFRKMMIIDAKLPYPTGNATAVLINGFHTPKGNVMAKKQVKGFMRFFSFSLLWSFFQWFYTGGDQCGFAQFPTFGLKAWKNTFYFDFSMTYVGTGMICSHLINLSLLFGAVFISIALILGDGLYNFIKVIYFSTLNFQACMKRRNQITCSVTDYNRNKTPDDLTRDEFFIKESVPIWLACAGYVVLTLISINVIPLIFHQVKWYFVVIAYLLAPILGFCNAYGTGLTDMNMAYNYGKVALFVLAALGGKSDGAVAGLVACGIIKSFASTSSDLMQDMKTGHLTLTSPRSMLVTQAIGTAIGCVIAPLTFFLFYHSFDLGNPNGEYKAPYAIIFRNMAILGVEGFSALPNHCLKFCYGFFAFAVLVNFIRDWNPKNIGKWVPLPMAMAVPFVVGAYFAVDMCVGSLVVFVWSKLKRKEANLMVPAVASGLICGDGIWVLPSTVLALFKVRPPICMSFVVNK* 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0843 638 PANTHER OLIGOPEPTIDE TRANSPORTER YGL114W-RELATED 9 289 IPR045035 GO:0035673
Psa6g0843 638 PANTHER OLIGOPEPTIDE TRANSPORTER YGL114W-RELATED 289 636 IPR045035 GO:0035673
Psa6g0843 638 TIGRFAM OPT_sfam: oligopeptide transporter, OPT superfamily 301 618 IPR004813 GO:0035673
Psa6g0843 638 TIGRFAM OPT_sfam: oligopeptide transporter, OPT superfamily 36 291 IPR004813 GO:0035673
Psa6g0843 638 Pfam OPT oligopeptide transporter protein 289 621 IPR004813 GO:0035673
Psa6g0843 638 Pfam OPT oligopeptide transporter protein 41 291 IPR004813 GO:0035673
Psa6g0843 638 PANTHER METAL-NICOTIANAMINE TRANSPORTER YSL3 289 636 - -
Psa6g0843 638 PANTHER METAL-NICOTIANAMINE TRANSPORTER YSL3 9 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0843 Psa-Chr6 29645124 29647628 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0843 - - gmx:100797196 941.799
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1732 5 134720465 134723131 Psa6g0843 6 29645124 29647628 ECH
Psa6g0843 6 29645124 29647628 Psa6g0843 6 29645124 29647628 ECH