Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1732 ATGGATACTAGAAATAATGAAGAAAGTGAGATAAGAGAAAACCTTGAAGAGGGTCCTGTGGCTATGATGGATGAGGAAGTGAATAGAATAGCACCTTGGAGGAAACAGATAACCGTTCGAGGATTAATAGCTAGTTTTGTAATTGGAGTCATTTATAGTGTGATTGTCATGAAACTCAATCTCACTACTGGATTAGTCCCTAATCTTAATGTCTCTGCGGCTTTACTTGGCTTTGTGTTTATTCGAATTTGGACTAAGATTCTTGCAAAGGCTAAGATTGTTTCGATTCCGTTTACTAGACAGGAGAATACCATCATTCAAACTTGTGCTGTTGCTTGCTATAGCATCGCCGTAGGAGGTGGTTTTGGGTCTTACCTATTGGGGTTGAATAGAAGGACTTATGAGCAAGCAGGGATTGATACACCGGGGAATACTCCTGGTAGTACTAAGGAGCCTGCAATCGGTTGGATGACAGCATTTCTATTTGTGACCAGTTTTGTTGGACTTTTAGCTTTGGTTCCTATTAGAAAGGTTTTCTATTTTAATATTGAATTGAATGGAAGTGGAACTGCTACTGCGGTTCTTATTAATGGATTCCATACACCTAAAGGAGATGTCATGGCCAAGAAGCAGGTTCATGGATTCGTGAAATTCTTTGCGTCAAGCTTTGTCTGGGCATTCTTTCAGTGGTTCTTTACCGGTGGAGATACTTGTGGATTTGTTCAATTTCCTACTTTTGGATTGCAAGCATGGAAAAACTCATTTTACTTCGATTTCAGTATGACTTATGTTGGAGCAGGAATGATCTGTTCTCATCTTGTTAATTTATCATTACTTCTTGGTGCTGTGGTTTCATGGGGCATCATGTGGCCGTTAATCAGAGGACTAAAGGAGAATGTCCTTGAGGATTTCATTCACACTCTCAAACAACTCTCGTCATTTGCAGTTTCCGTTAACCAGAAACAGTTGCCTCTTGATGATCTAAGACGCAACGAAATGTTTGCGAGAGAAAATATTCCAATATGGTTGGCATGTACAGGGTACATATTTTTCTCCGTCATCTCTATTGTTGTAATCCCGTTGATGTTCCCTCAGGTGAAGTGGTATTTTGTCCTGTTTGCATATATTTTTGCGCCTTCTCTTGGCTTCTGCAATGCTTACGGTGCTGGATTAACCGATATGAACATGGCCTATAACTATGGAAAAGTAGCTCTCTTTGTACTTGCAGCTTTGGCTGGAAAAAGTGACGGTGTAGTTGCTGGACTTGTAGGGTGTGGTTTGATTAAATCAATTGTTTCAATTTCATCTGATTTAATGCATGATTTGAAGACAGGCCATCTCACATTGACTTCGCCGCGTTCGATGCTTGTAAGCCAAGCAATTGGTACAGCAATAGGTTGTGTTGTTGCTCCTATCACATTCTTCCTTTTTTACAAAGCTTTTGATGTCGGGAATCCAGATGGTGTTTACAAGGCTCCATATGCTATTATATATAGAAACATGGCAATTTTGGGCGTGGAAGGTTTTTCCGCACTTCCACGTCACTGCTTGCAATTGTGTTGTGGATTTTTTGTGTTTGCAATAGTGGCTAATTTGTTGAGAGATCTTGGCCCGAAAAAAGTTGGTAGATGGATTCCACTTCCAATGGCTATGGCTGTGCCTTTTCTTGTTGGTGGTTACTTTGCCATTGACATGTGTGTGGGAAGTTTGATTGTGTTTGCATGGCATATCCTGAACAAAAGTGAAGCAGGTTTGATGGTTCCTGCAGTTGCTTCTGGTTTGATTTGTGGAGATGGATTATGGATTCTTCCTTCATCCATTCTTGCTTTGTTAAAGATTCGTCCCCCGATTTGCATGAGCTTCTTCCCATCTAGGTAG 1878 0.4063 MDTRNNEESEIRENLEEGPVAMMDEEVNRIAPWRKQITVRGLIASFVIGVIYSVIVMKLNLTTGLVPNLNVSAALLGFVFIRIWTKILAKAKIVSIPFTRQENTIIQTCAVACYSIAVGGGFGSYLLGLNRRTYEQAGIDTPGNTPGSTKEPAIGWMTAFLFVTSFVGLLALVPIRKVFYFNIELNGSGTATAVLINGFHTPKGDVMAKKQVHGFVKFFASSFVWAFFQWFFTGGDTCGFVQFPTFGLQAWKNSFYFDFSMTYVGAGMICSHLVNLSLLLGAVVSWGIMWPLIRGLKENVLEDFIHTLKQLSSFAVSVNQKQLPLDDLRRNEMFARENIPIWLACTGYIFFSVISIVVIPLMFPQVKWYFVLFAYIFAPSLGFCNAYGAGLTDMNMAYNYGKVALFVLAALAGKSDGVVAGLVGCGLIKSIVSISSDLMHDLKTGHLTLTSPRSMLVSQAIGTAIGCVVAPITFFLFYKAFDVGNPDGVYKAPYAIIYRNMAILGVEGFSALPRHCLQLCCGFFVFAIVANLLRDLGPKKVGRWIPLPMAMAVPFLVGGYFAIDMCVGSLIVFAWHILNKSEAGLMVPAVASGLICGDGLWILPSSILALLKIRPPICMSFFPSR* 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1732 625 PANTHER METAL-NICOTIANAMINE TRANSPORTER YSL3 7 300 - -
Psa5g1732 625 PANTHER METAL-NICOTIANAMINE TRANSPORTER YSL3 308 623 - -
Psa5g1732 625 TIGRFAM OPT_sfam: oligopeptide transporter, OPT superfamily 320 605 IPR004813 GO:0035673
Psa5g1732 625 TIGRFAM OPT_sfam: oligopeptide transporter, OPT superfamily 31 307 IPR004813 GO:0035673
Psa5g1732 625 PANTHER OLIGOPEPTIDE TRANSPORTER YGL114W-RELATED 308 623 IPR045035 GO:0035673
Psa5g1732 625 PANTHER OLIGOPEPTIDE TRANSPORTER YGL114W-RELATED 7 300 IPR045035 GO:0035673
Psa5g1732 625 Pfam OPT oligopeptide transporter protein 319 608 IPR004813 GO:0035673
Psa5g1732 625 Pfam OPT oligopeptide transporter protein 36 296 IPR004813 GO:0035673
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1732 Psa-Chr5 134720465 134723131 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1732 - - gmx:100820417 1045.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1732 5 134720465 134723131 Psa6g0843 6 29645124 29647628 ECH
Psa5g1732 5 134720465 134723131 Psa5g1732 5 134720465 134723131 ECH