Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0730 ATGGCAGAAGAGAAAGCGGTTACTAGCGGCGGTGGCGGTGGCGGTGAGAAGAAAGAGAAGACGACTGACACTGTTGATTCTACTCATGAAAACGGAAAGACGAAGCGTAAAGGTTTAATTTCTCGAATTTGGAATTTTATATTTAGGTCTAATAGAGATAATTTGGAAAAAAGGCTTCAGAGTATTTCTAAGGAAGAATCTTCGATTATGAGTAGAATGAACAAGAGATCCCGTTCTTGGAGGCGAGCTTCTCGCCATATTATTATTTTCTCTGTTTTATTTGAGGTCATTGCCGTAGCTTATGCGATTATGACAACAAGAACTGTGGATATGAATTGGAAAATGAGGGCAATTCGAGTTTTGCCGATGTTTCTTTTGCCTGCATTTTCATCTGCTGCATATTCAACATTTGTAAGCTTCATAAGGATGTGTGATCGCAGGGACCAAAAAACTCTTGATAGGCTGAGAGCTGAAAGGAAGGAAAAAATTGACGACCTCAAAGAGAAGACAAACTATTACATTACTCAACAACTCATTCAGAAATATGACACAGACCCAGCAGCAAAGGCGGCTGCTGCAACTGTTTTGGCATCCAAGTTGGGTGCAGAATCAGGTTTGAAACTGCACATGGCAGATGAATCCATATCTGGTGCTCCGACAGGAAAGACCAACAATGTTGAACTTGTGCAGTCTGGTGGACTTAGGAATCGCAAACAAGGGCAAGCTCAATCCACTACTCTAGGGACAACAGCTCCAAATCATCCCGATCAACAATTAGTTGCTTCTAGGGGAACTGATCAAACTCAGACTCACACGCAGAAACAGGTTGTAGTTGTTGAGCATCACCAACCTCAAAGCTCAACAAAGTATGATGGAGGATGGATTGCTCAAATTGCAGCATTGCTTGTGGGTGAGGATCCAAAGCAGTCTTATGCACTCATATGTGGTAACTGCTATATGCATAATGGTCTTGCTCGGAGAGAGGATTTCCCATTTATCACTTACTACTGCCCACACTGCCACGCCCTGAACAAACCAAAGCATTCAGCTGAGCCCATATCTGCTCTTAATTCGACAAACACCAGGTCCCCTAAAACAGATGGAGAGGCAGATAAAAATGATAGTATTTGTGCTTCTGACAGTTCGGTCACTAACAATGAACCAGTAAATGCTACCCGTGAGATCGAGCACACATCTGAAGAGGTTGAGTTAGGAGGGAATGAAGAAAGATAG 1233 0.4274 MAEEKAVTSGGGGGGEKKEKTTDTVDSTHENGKTKRKGLISRIWNFIFRSNRDNLEKRLQSISKEESSIMSRMNKRSRSWRRASRHIIIFSVLFEVIAVAYAIMTTRTVDMNWKMRAIRVLPMFLLPAFSSAAYSTFVSFIRMCDRRDQKTLDRLRAERKEKIDDLKEKTNYYITQQLIQKYDTDPAAKAAAATVLASKLGAESGLKLHMADESISGAPTGKTNNVELVQSGGLRNRKQGQAQSTTLGTTAPNHPDQQLVASRGTDQTQTHTQKQVVVVEHHQPQSSTKYDGGWIAQIAALLVGEDPKQSYALICGNCYMHNGLARREDFPFITYYCPHCHALNKPKHSAEPISALNSTNTRSPKTDGEADKNDSICASDSSVTNNEPVNATREIEHTSEEVELGGNEER* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0730 410 Coils Coil 152 172 - -
Psa6g0730 410 Pfam Predicted integral membrane zinc-ribbon metal-binding protein 294 344 IPR019273 -
Psa6g0730 410 MobiDBLite consensus disorder prediction 16 33 - -
Psa6g0730 410 MobiDBLite consensus disorder prediction 233 255 - -
Psa6g0730 410 PANTHER INTEGRAL MEMBRANE METAL-BINDING FAMILY PROTEIN (DUF2296) 22 403 - -
Psa6g0730 410 MobiDBLite consensus disorder prediction 1 33 - -
Psa6g0730 410 MobiDBLite consensus disorder prediction 375 392 - -
Psa6g0730 410 MobiDBLite consensus disorder prediction 355 410 - -
Psa6g0730 410 MobiDBLite consensus disorder prediction 393 410 - -
Psa6g0730 410 PANTHER ENDOPLASMIC RETICULUM JUNCTION FORMATION PROTEIN LUNAPARK 22 403 IPR040115 GO:0071786
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0730 Psa-Chr6 25488341 25492501 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0730 K23292 - gmx:100815496 519.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g0730 6 25488341 25492501 Psa5g0603 5 48039675 48043691 PCT