Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0603 ATGGCGGATGATAAAGCAGTTGTGGAAGTTGAAAAGAAAGAGACAACTCCTACTGCTGCTGCGGCTGGAAACGAAAAGAAAAAGGGAAAAGGATTCTTTTCTCGGATTTTGAATGGATTTTTTAGGGTTTTTAGGTCACACGGCGATGATTTCGAAAAGCGCCTTCAACATATTTCTAAAGAGGAAGCTTCTATTATTGCTAAAGTCGCCAGGAGATCACGATCAAGGAGACGCGTGTCCCGCAATCTTATCCTATTTTCTGTTATACTTGAGGTCATTGCTGTAGGGTATGCTATTATGACAACACGGTCAATGGGTATCGATTGGAAAATGAGGGCAATCCGGGTTTTACCCATGTTTCTCTTGCCTGCACTATCAACTGCTGCTTATTCAGCATTTATCAGCTTCACAAGAATGTGTGATCAAAGGGACCAAAATGTTCTTGAAAAGCTTCGAGCTGAAAGGCAAGCAAAAATTGATGAACTCAAAGAAAAAACAAATTATTACTCCACACAACAGCTTATTCAGCGATATGACCCAGACCCAGCCGCAAAGGCAGCTGCAGCAACTGTTTTGGCATCTAAATTGGGTGCAGATTCTGGTTTGCAATGGTATATGGGCGATGACTCCAATCTCAGTGGTGCTTCAACAGGAAAAAGCAATGATGTTGAACTTGTGCAGTCCTCTGGACTTCGAAATCGGAGACAAGCTCAAACTAGATCCACTGCTGGTACAGGGACAACCTCACCAAATTTTGCTGATCAACAATTAGTAGGTTCAGGTGGATTCGATCAAACCCAGGGGTCTGAGTATAATCAACCTACTGTCGTTGAACATCAACCTCAAAGTTCAAACCCACAAGATGCAGGATGGATTGCAAGAATTGCAGCGATGCTTGTGGGTGAGGATCCAACTCAATCTTATGCTCTCATATGCGGCAACTGCCACATGCATAACGGTCTTGCTCGAAAGGAGGATTTCCCATTTATCACTTATTACTGCCCGCATTGCCATGCGCTGAACAAACCAAAGCAATTGGACGGTGTCTCCGGTCTTCCTTCCCCTAATTCGAGGTCTGTGCAAAGGGATGGACGTATATTGGCCCTTCCTCCCCTTAATGCGGCAGGTTCTGTGCAATTGGATGAACATATCTCGGGCCTTCTTTCCCCTAGCGCTGGGTCTGTGCAATTGGATGAACTCACCTCGGGCCTTCCTTCCCCTAAGGCAGGGTCTCCCAAAACAGGCGACAGTGAGGCAGTTTTAAATGCTAGTGCTTCTGCTGCAGAGAGCACAATCACAAGCAATAGTCCCGTAAATGATAGCCCCGAGATTGAGGAAGTATCAGAAAGGACAAGTTTAGAGGAGAAAACTGATTGA 1377 0.451 MADDKAVVEVEKKETTPTAAAAGNEKKKGKGFFSRILNGFFRVFRSHGDDFEKRLQHISKEEASIIAKVARRSRSRRRVSRNLILFSVILEVIAVGYAIMTTRSMGIDWKMRAIRVLPMFLLPALSTAAYSAFISFTRMCDQRDQNVLEKLRAERQAKIDELKEKTNYYSTQQLIQRYDPDPAAKAAAATVLASKLGADSGLQWYMGDDSNLSGASTGKSNDVELVQSSGLRNRRQAQTRSTAGTGTTSPNFADQQLVGSGGFDQTQGSEYNQPTVVEHQPQSSNPQDAGWIARIAAMLVGEDPTQSYALICGNCHMHNGLARKEDFPFITYYCPHCHALNKPKQLDGVSGLPSPNSRSVQRDGRILALPPLNAAGSVQLDEHISGLLSPSAGSVQLDELTSGLPSPKAGSPKTGDSEAVLNASASAAESTITSNSPVNDSPEIEEVSERTSLEEKTD* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0603 458 MobiDBLite consensus disorder prediction 1 24 - -
Psa5g0603 458 Coils Coil 145 168 - -
Psa5g0603 458 PANTHER INTEGRAL MEMBRANE METAL-BINDING FAMILY PROTEIN (DUF2296) 14 455 - -
Psa5g0603 458 Pfam Predicted integral membrane zinc-ribbon metal-binding protein 291 341 IPR019273 -
Psa5g0603 458 MobiDBLite consensus disorder prediction 443 458 - -
Psa5g0603 458 MobiDBLite consensus disorder prediction 424 458 - -
Psa5g0603 458 MobiDBLite consensus disorder prediction 424 442 - -
Psa5g0603 458 MobiDBLite consensus disorder prediction 227 252 - -
Psa5g0603 458 PANTHER ENDOPLASMIC RETICULUM JUNCTION FORMATION PROTEIN LUNAPARK 14 455 IPR040115 GO:0071786
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0603 Psa-Chr5 48039675 48043691 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0603 K23292 - gmx:100797087 508.834
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g0730 6 25488341 25492501 Psa5g0603 5 48039675 48043691 PCT