Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0700 ATGCTGAAGCAACTTTTCAACAAGCTTCCCCGGAAATCTTCCAAAATCGATGAAGATGAGTCGACCCAGGTTGGAGATTCTCCACGTGTTGCCGGTAAATGCCACAATCGGCAGCAAGGTGGCGCTTCTTCGTTGAAACGAGCTTCTTCATCGGCAGTGTTTCCGGCTAGCATGGTTTCTGGGATTGAACCTTTGGTGCCGTTTAAGGATGTTCCGAATGCTGAAAAGATGAACCTGTATGTGAGCAAATTGAGTCTTTGTTGTGTGACATTTGATTTCACTGACCCTGGTAAGAACATTGCTGATAAAGATGTGAAAAGGAAAACTTTAGTTGAACTTGTTGATTTTGTGGCTTGTGGATCAATGAAGTTTAGTGAACCTGCTATTCTTGCAATGTGTAGAATGTCTGCTATTAATTTGTTTAGAGTTTTTCCGCCTAATTATAGGGTTAATGGAGTTTTTGCTAGTGGTGGTGAGAATGATGATGATGACCCAATGTTTGATCCTGCTTGGCCACATTTGCAACTTGTATATGAATTGCTGCTTAAATTTATCTCATCTTCGTGCCTCGATGCTAAGGTAGCAAAAAAGTATATCGATCATTCGTTCATTTCGAAATTGCTTGAACTGTTTGATTCCGAGGATCCAAGAGAAAGAGACTGTTTGAAGACAATTCTGCACAGGGTTTATGGGAAGTTCATGGTGCATAGGCCGTTTATTCGAAAAACAATTAACAATATATTCTACCGATTTGTGATTGAGACCGAGAAACATAACGGGATTGCCGAGTTGTTGGAGATTTTCGGCAGTGTGATTTGTGGATTTGCATTACCCTTGAAAGAGGAACATAAAATCTTCTTGTGGAGAGTTTTGATCCCCTTACACAAGCCTAAATCTTTGGGGGTGTACTTTCAGCAACTGTCCTTCTGTATTACGCAGTTCTTAGAGAAGGAGCCGAAGTTAGCGAGCATTGTTATAAGTGGTCTGTTGAAATATTGGCCAGTAATAAATAGTCAGAAAGAAGTGATGTTTCTCGGGGAACTGGAAGAAATTTTGGAAGGAATCAACATGGTAGAGTTCCAGAGGATCATGATTCCACTGTTTTTGCGGATTTCGTGCTGCATTAACAGCCTACACTTTCAGGTAGCTGAAAGGACGCTTTTCCTATGGAACAACGACCACATTGTAAATTTGATTGCTCATAACCGTCAAGTGATCCTGCCAATCATATTTCCGGCACTAGATAGGAATATTAAAAGCCACTGGAACCCAGCAGTTGTAAACTTAACTCATAACATCAGAAAGATGTTCTTGGAGATGGATGAGAAGCTTTTCATATCTTGCCATACTCAATTTAAGGAAGAAGAAGCAATTTTAATCTCAGAAGCCGAAAAGCGAAAGGAAGCATGGAAACAGCTAGAGCAGGCAGCCAGTCTCAAGCCTGTAATTGGAAATACTGCTGTTTTAGTGTCTCCTTTGATGACATAA 1488 0.4066 MLKQLFNKLPRKSSKIDEDESTQVGDSPRVAGKCHNRQQGGASSLKRASSSAVFPASMVSGIEPLVPFKDVPNAEKMNLYVSKLSLCCVTFDFTDPGKNIADKDVKRKTLVELVDFVACGSMKFSEPAILAMCRMSAINLFRVFPPNYRVNGVFASGGENDDDDPMFDPAWPHLQLVYELLLKFISSSCLDAKVAKKYIDHSFISKLLELFDSEDPRERDCLKTILHRVYGKFMVHRPFIRKTINNIFYRFVIETEKHNGIAELLEIFGSVICGFALPLKEEHKIFLWRVLIPLHKPKSLGVYFQQLSFCITQFLEKEPKLASIVISGLLKYWPVINSQKEVMFLGELEEILEGINMVEFQRIMIPLFLRISCCINSLHFQVAERTLFLWNNDHIVNLIAHNRQVILPIIFPALDRNIKSHWNPAVVNLTHNIRKMFLEMDEKLFISCHTQFKEEEAILISEAEKRKEAWKQLEQAASLKPVIGNTAVLVSPLMT* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0700 495 Gene3D - 72 476 IPR011989 -
Psa6g0700 495 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 491 IPR002554 GO:0000159|GO:0007165|GO:0019888
Psa6g0700 495 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 67 477 IPR002554 GO:0000159|GO:0007165|GO:0019888
Psa6g0700 495 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT 1 491 - -
Psa6g0700 495 PIRSF PP2A_B56 6 491 IPR002554 GO:0000159|GO:0007165|GO:0019888
Psa6g0700 495 SUPERFAMILY ARM repeat 78 473 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0700 Psa-Chr6 24081357 24083056 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0700 K11584 - gmx:100781390 847.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g0700 6 24081357 24083056 Psa6g0700 6 24081357 24083056 ECH
Psa5g0622 5 49393520 49396162 Psa6g0700 6 24081357 24083056 ECH