Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0622 ATGATCAAGCAAATCCTAAGTAAACTTCCTCGGAAAACATCAAAGACCGACTCGGACGAGTCATGCCGAGGTGACTCGTCCTGCCGGAGCGATTTGCCTCGTGCCGGGAAAAGTAGCAGGTCTCACGGCGGCAATGACGGTGCCAAAAGCAATGCAGCGAAAAGGAATTCATCGGCGGCTGTTTTTCCGACAAGCACCGTGTCGTTGATAGAACCGTTGGTGCCGTTTAAGGATGTTGCGAGTTCTGAGAAGATGAACCTTTTCGTGAGCAAGTTGAGTCTTTGTTGTGTTGCGTTTGATTTCACCGATCCTGGTAAGAACATTGTGGAGAAAGATGTAAAAAGAAAAACTTTGGTTGAACTTGTTGATTTTGTTTCTTCTTTTGGGTCTGCAAGGTTTAGTGAGCCTGCTATTCTTGCAATGTGTAGAATGTGTGCTATTAATCTCTTTCGTGTTTTCCCGCCAAATTATAGAGCCAATAATCGAGGCGGTGGTGGTGAGAATGACGATGACGAACCGTCGTTCGATCCTGCTTGGCCTCATCTTCAACTTGTTTATGAATTGTTGCTTAAATTTATAACATCTTCTTGCCTTGATGCTAAGGCTGCAAAAAAGTATTTTGATCATTCGTTTATTTCAAAATTGTTGGAGTTGTTTGATTCAGAGGATCCTCGAGAAAGGGATTGTTTAAAGACAATAATGCATAGGGTTTATGGCAAATTCATGGTTCATAGACCTTACATTCGGAAATCGTTTAACCATGTGTTTCATAGGTTTGTGTTTGAGACCGAGAAGCATAACGGGATTGCAGAGTTGTTGGAGATTTTTGGGAGCGTAGTAAGTGGATTTGCTTTGCCATTGAAAGAGGAACACAAGATCTTCTTGTGGAGAATTTTGATCCCTTTGCACAAGCCTAGATCTATGGGGGCTTACTTCCAACAATTGTCTTATTGTGTTACACAGTTTATAGAGAAAGAGCCTAAGTTGGCAAGCATTGTAATAAGGGGTTTGTTGAAATATTGGCCAATAACACATAGTCAGAAAGAGGTGATGTTTCTCGGTGAATTGGAAGAAATTTTGGAAACAATTAACATGGTTGAGTTCCAAAGGGTCATGGTACCATTGTTTTGGCGAATTGGATGCTGCATTAGCAGTTTGCATTTTCAGGTATCTGAAAGAGCCCTTTACTTATGGAACAATGACCACATTGTCAATTTGATTGCTCACAACCGTCAGGTGATACTACCTATCATAATTCCAGCACTTGAGAGAAACTCTCGGAGCCACTGGAACCCGGCAGTGCTCAACCTAACTCATAACGTTAGAAAGATGTTCATGGAGATGGATGAGAATCTGTTCCTTTCTTGTCGATCTCAGTTTAAGGAGGAAGAAGCAATGCTAAACACAGAATCGGAGAAACGGAAAGAAGCTTGGAAACAATTAGAACATGCAGCCAGTCTCAAACGTACAATCGGAAACACTGCGGTTTTAGTGTCTCCGGTTTTATAA 1509 0.4175 MIKQILSKLPRKTSKTDSDESCRGDSSCRSDLPRAGKSSRSHGGNDGAKSNAAKRNSSAAVFPTSTVSLIEPLVPFKDVASSEKMNLFVSKLSLCCVAFDFTDPGKNIVEKDVKRKTLVELVDFVSSFGSARFSEPAILAMCRMCAINLFRVFPPNYRANNRGGGGENDDDEPSFDPAWPHLQLVYELLLKFITSSCLDAKAAKKYFDHSFISKLLELFDSEDPRERDCLKTIMHRVYGKFMVHRPYIRKSFNHVFHRFVFETEKHNGIAELLEIFGSVVSGFALPLKEEHKIFLWRILIPLHKPRSMGAYFQQLSYCVTQFIEKEPKLASIVIRGLLKYWPITHSQKEVMFLGELEEILETINMVEFQRVMVPLFWRIGCCISSLHFQVSERALYLWNNDHIVNLIAHNRQVILPIIIPALERNSRSHWNPAVLNLTHNVRKMFMEMDENLFLSCRSQFKEEEAMLNTESEKRKEAWKQLEHAASLKRTIGNTAVLVSPVL* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0622 502 MobiDBLite consensus disorder prediction 1 56 - -
Psa5g0622 502 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT 1 499 - -
Psa5g0622 502 SUPERFAMILY ARM repeat 86 481 IPR016024 -
Psa5g0622 502 Gene3D - 81 484 IPR011989 -
Psa5g0622 502 MobiDBLite consensus disorder prediction 10 27 - -
Psa5g0622 502 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 499 IPR002554 GO:0000159|GO:0007165|GO:0019888
Psa5g0622 502 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 75 485 IPR002554 GO:0000159|GO:0007165|GO:0019888
Psa5g0622 502 PIRSF PP2A_B56 4 499 IPR002554 GO:0000159|GO:0007165|GO:0019888
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0622 Psa-Chr5 49393520 49396162 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0622 K11584 - gmx:100808283 828.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g0622 5 49393520 49396162 Psa5g0622 5 49393520 49396162 ECH
Psa5g0622 5 49393520 49396162 Psa6g0700 6 24081357 24083056 ECH