Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0668 ATGATGGATTCAATTAACCCTTTGCCCGCTGATGGACTTGATGTGGTCCACCAAAACGGCGTTGATGACGAACCTTCTAATTCTGGAGAGGACGGTGTTGTTTCAAATGGCTTAGACCCCCATGTTACTGAAACTACAGAAACCGTAGCTTTGAATGGAAATTTTGAAAGTTTCGACCTGTCAGAAAGCACTGCAACTGGAAACTCGGCTATGGAGGAAACTGAAGAAACAAATGACAGTGTGGATGGCAATAGTCTCACTGTTTCAAAGGAAAAGGAAGTGAAGATAACAGTTCAAACGGAACAATCAAAAGCACAGAAGGGTCCTGTCAAGATTAAGAATGCAAAGGTTGCTAGTTCCAGTGGTATTCGTGCTAGTTTGGTGAAAAACAACAAAATTGGAAAAGACAAACAAGCATCATCTGCTGTTTCAAATGGAACTTCTGCTGTAGACTCCCGCCCAAAACAGCCTAGTAAAAGCAGATCATTCAATGACCGGCAGTCCCAATTGTCCAAGCACCCTTCAAAGTCTGAGGCAGCATCTTCTCAAGTTGCAGCGGAGAAGAAAAATCCAAAATCATTGAAAAAGGGAACTCTTGATAAAGTTCAAGGAGAAGCAGAACCTTCTCTTACCAATGCAGAAGATGCCAAACCTCGCAGGGTGGGGACACTTCCAAATTATGGATTCAGTTTCAGGTGCGGTGAACGAGCTGAGAAAAGGAGAGAGTTCCTCAATAAGGTTGAGGAAAAGATTCAGGCAAAGGAGGAGGAGAAGAGTACCTTGCAGGCAAAATCCAAGGAGAGCCAAGAAGCCGAGATTAAAAAGCTTAGGAAGAGTCTAACTTTTAAAGCAACTCCAATGCCAACTTTCTATCAGGAGCCTGCTCCTCCTAAGGTAGAGCTGAAGAAGATACCAACCACAAGAGCTAAATCTCCCAAGCTCGGCCGAAAGAAGAATTCCACAAATTCAGAGTCTGATGGAAACGGAAGCACCAGTTCTCGACAAGGTCGATTAAGTCTGCAGGAGAAAGTGCTACAGAGCAACTCCACTAAAGGAATTACCCTTGTCAATCAAAAGAAGCCGATACGAAAGTCCCTTCCTACTCGACTGGCTTCTGAAAAGACCAATTCAACCGCGGCACCTACATCGAGGGCAACAAAGAAAGATACTACCTTAACCAAAGCAACAAATGAAGAGAAAACCGAGATCGTTGCAGTCAATGAAGAGAAAACGGAGATCATTGCAGTCAATGAAGAGAACAACACTCTTTCCAGTGAGACAAATGCTGCTCTTCCTCTGAATGTGGTTCCTTCAGATAAACCAAGTGAAGAAGAATCTCATGTGAATGGTGACATAATAGTGGTTGAAGAGAATCCTCACCTTACCTTGTCACCAGAAGCGATAACGACCGTGCATTGA 1419 0.4369 MMDSINPLPADGLDVVHQNGVDDEPSNSGEDGVVSNGLDPHVTETTETVALNGNFESFDLSESTATGNSAMEETEETNDSVDGNSLTVSKEKEVKITVQTEQSKAQKGPVKIKNAKVASSSGIRASLVKNNKIGKDKQASSAVSNGTSAVDSRPKQPSKSRSFNDRQSQLSKHPSKSEAASSQVAAEKKNPKSLKKGTLDKVQGEAEPSLTNAEDAKPRRVGTLPNYGFSFRCGERAEKRREFLNKVEEKIQAKEEEKSTLQAKSKESQEAEIKKLRKSLTFKATPMPTFYQEPAPPKVELKKIPTTRAKSPKLGRKKNSTNSESDGNGSTSSRQGRLSLQEKVLQSNSTKGITLVNQKKPIRKSLPTRLASEKTNSTAAPTSRATKKDTTLTKATNEEKTEIVAVNEEKTEIIAVNEENNTLSSETNAALPLNVVPSDKPSEEESHVNGDIIVVEENPHLTLSPEAITTVH* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0668 472 MobiDBLite consensus disorder prediction 1 35 - -
Psa6g0668 472 MobiDBLite consensus disorder prediction 250 279 - -
Psa6g0668 472 MobiDBLite consensus disorder prediction 21 35 - -
Psa6g0668 472 Pfam Targeting protein for Xklp2 (TPX2) domain 229 300 IPR027329 -
Psa6g0668 472 MobiDBLite consensus disorder prediction 316 356 - -
Psa6g0668 472 Coils Coil 237 274 - -
Psa6g0668 472 PANTHER PROTEIN WVD2-LIKE 4 2 458 IPR044833 GO:0008017
Psa6g0668 472 Coils Coil 406 426 - -
Psa6g0668 472 MobiDBLite consensus disorder prediction 50 228 - -
Psa6g0668 472 MobiDBLite consensus disorder prediction 50 85 - -
Psa6g0668 472 MobiDBLite consensus disorder prediction 369 388 - -
Psa6g0668 472 PANTHER PROTEIN WVD2-LIKE 5-RELATED 2 458 - -
Psa6g0668 472 MobiDBLite consensus disorder prediction 250 388 - -
Psa6g0668 472 MobiDBLite consensus disorder prediction 119 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0668 Psa-Chr6 22825830 22830791 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0668 - - gmx:100786958 585.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g0668 6 22825830 22830791 Psa6g0668 6 22825830 22830791 ECH
Psa6g0668 6 22825830 22830791 Psa5g0670 5 54274350 54279218 PCT