Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0670 ATGGATCCGAGTGATATTTCAGTGGTAGATGGATTTGAAGCAGTGGATCAAAATGGTGTTGATTCAAATGTAGACTCTGTTGTTACTGTAATTGAAGAAAATGTAATGGTGTCCAATGGAGATTTTGAAAATTTTGATGGTGATTTGTGTATGGAAGAATTGAAAGAAGGATTGAATGGGAAAATTGAGGGAAACAATGTTGGCATTTTGAAGGAAGAGGACGTTGAAATCGGAGATGGAAAGGAGAAATCTAGAACAGGGAACGGTCTTGTGAAGAATAAGAAAGTGAAACAACCTAAAAGTGTTCATACAGGTTTGGTACGAAAGAACAAAGTCGGGAAAGATGAAGAGGTGGTAGCAGCATCTTCTGTTTCGAATGGTACTTCCGCTTTAGACTCTCATCCAAGACTGGCGGTTAAGAGCAGAGCATTGAACGACAAGCAGACTCGATTGAACAAGCACGCTGGAAAGTCTGATGCAGCATCTTCTGAAGCACCAATGGAGAAGACTAGACCACAGTTAATAAAGAAAGAACCCCTTGATAATCTTCCAGGAAATGCTGAGTTATCTTCTCCTACAGCAGAAGATGGCAAACCTCGCAGAATGGGGACAATGCCAACTTATGGATTCAGTTTCAAATGTAATGAGCGAGCTGAGAGAAGAAAAGAGTTTTACTCTAAGCTCGAGGAAAGGATTCATGCGAAGGAAGTGGAGGAGAGCAATATGCAAGCAAAAACCAAGGAGAGCCAAGAAGCTGAAATTAGGAGGCTTAGGAAAAAACTAGCATTTAAAGCAACTCCAATGCCAAGCTTCTACCAAGAACCTCCTCCTTCTCGGGTGGAGTTGAAGAAGATACCAACTACAAGAGCAAAATCTCCCAAGCTTGGTCGTAAGAAGACTTCAACATCTTCAGAGCTAGAAGGAAACACCATAAGCACAGCTCAACAATGTCGTTTAAGTCTGGATGAGAAATTATCTCAGAATAACCCCACTAAAGGAATTAGTCCTGTTCACCTAAAGAAGCCACAACGGAAATCTCTCCCTCCTCGACTGACTCCTGAAAGGATCAGTTCACCCAATACAACAACTGCACGGACTCCGTCTAAGCCGGTGAATGACGAGAAAGCCTCCTTATCTAGTGTAACAGCTGATGTTACCACCTTGTCTATTGCAACAAAGGAAGAGAATGTTGAAGCAGCTGCAGCTATCGAGGAGAACAATGCCATGTCTGATGAGACAAGTGAAACTCTGTCTCTGAACATAGATCCAGGTGAAGTAGAATCCCATGTGAATGGTGATATAGTCATTGAAGACAAACCACAGCTCACCTTGGTACAAGAACCTATAGCAGCAGAGTATTAA 1362 0.4214 MDPSDISVVDGFEAVDQNGVDSNVDSVVTVIEENVMVSNGDFENFDGDLCMEELKEGLNGKIEGNNVGILKEEDVEIGDGKEKSRTGNGLVKNKKVKQPKSVHTGLVRKNKVGKDEEVVAASSVSNGTSALDSHPRLAVKSRALNDKQTRLNKHAGKSDAASSEAPMEKTRPQLIKKEPLDNLPGNAELSSPTAEDGKPRRMGTMPTYGFSFKCNERAERRKEFYSKLEERIHAKEVEESNMQAKTKESQEAEIRRLRKKLAFKATPMPSFYQEPPPSRVELKKIPTTRAKSPKLGRKKTSTSSELEGNTISTAQQCRLSLDEKLSQNNPTKGISPVHLKKPQRKSLPPRLTPERISSPNTTTARTPSKPVNDEKASLSSVTADVTTLSIATKEENVEAAAAIEENNAMSDETSETLSLNIDPGEVESHVNGDIVIEDKPQLTLVQEPIAAEY* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0670 453 MobiDBLite consensus disorder prediction 122 203 - -
Psa5g0670 453 PANTHER PROTEIN WVD2-LIKE 4 1 443 IPR044833 GO:0008017
Psa5g0670 453 MobiDBLite consensus disorder prediction 297 312 - -
Psa5g0670 453 MobiDBLite consensus disorder prediction 353 379 - -
Psa5g0670 453 PANTHER PROTEIN WVD2-LIKE 5-RELATED 1 443 - -
Psa5g0670 453 Coils Coil 225 255 - -
Psa5g0670 453 MobiDBLite consensus disorder prediction 267 312 - -
Psa5g0670 453 MobiDBLite consensus disorder prediction 327 379 - -
Psa5g0670 453 MobiDBLite consensus disorder prediction 79 110 - -
Psa5g0670 453 MobiDBLite consensus disorder prediction 139 154 - -
Psa5g0670 453 Pfam Targeting protein for Xklp2 (TPX2) domain 210 280 IPR027329 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0670 Psa-Chr5 54274350 54279218 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0670 - - gsj:114408962 545.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g0670 5 54274350 54279218 Psa5g0670 5 54274350 54279218 ECH
Psa6g0668 6 22825830 22830791 Psa5g0670 5 54274350 54279218 PCT