Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0552 ATGACATCGCCACATGTTACAGATGACCCGACACAGACACAACAAAGAATCAAAGAAGGGTTGGACATGGATGGGAAGGTTATGAAGGAAGCTGAAGTGGCGGACGTTGGGAAAGTTGTGAAAGAAACTGAAGTATCGGAGGTGGACGCGGTTTCCACTGCAAAATGTTGCTGCTGCGGACTGGTGGAAGAGTGCACACTCGCATACATTATGCGCGTGAGGGAGAGATTCGGTGGAAGATGGATATGTGGATTGTGTTCCGAGGCTGTGAAGGAAGAAAGAGCGAGATCAAAGAGTGAGGAGAAGCTAATCACAATGGATGAAGCTCTAAAGCGGCACACCAAATTTCGCCAGCAGTTTAGGTCTTCTGCTACTGATCATAAGAAAGACTTCATAGATGCTGTGAAACAGATTTTCTTTAGGACTTTGGATTCTCCTAGGAAGAAGGAAAGTTTTGCTTGTAGACCTCTTGGTAGATCCAGTAGTTGCTTCCCAACAATGGAAACAACTCCGCCGAGGACGACAGAGACACACACAGAGTGA 543 0.4659 MTSPHVTDDPTQTQQRIKEGLDMDGKVMKEAEVADVGKVVKETEVSEVDAVSTAKCCCCGLVEECTLAYIMRVRERFGGRWICGLCSEAVKEERARSKSEEKLITMDEALKRHTKFRQQFRSSATDHKKDFIDAVKQIFFRTLDSPRKKESFACRPLGRSSSCFPTMETTPPRTTETHTE* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0552 180 Pfam Protein of unknown function (DUF1677) 51 141 IPR012876 -
Psa6g0552 180 PANTHER OS01G0745000 PROTEIN 39 168 IPR012876 -
Psa6g0552 180 PANTHER DUF1677 FAMILY PROTEIN 39 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0552 Psa-Chr6 18280278 18281824 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0552 - - gmx:100795601 165.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g0552 6 18280278 18281824 Psa6g0552 6 18280278 18281824 ECH
Psa5g0816 5 65277196 65278569 Psa6g0552 6 18280278 18281824 ECH
Psa4g3902 4 326118177 326119607 Psa6g0552 6 18280278 18281824 ECH