Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3902 ATGCTAACTTGTTTGATAATTGATTTTTTTTTTTTCATTATAGGGTGGTTGAAAATGTCTGCAACAATGATAAGTGATGCAATGATGATAACAGCACCAGAAACTCAATCAACAACTAGTAGCAATCTAGTTGCACAGAATGAAGTTGAATTTGCAGTATGTGAATGTTGTGGACTAACAGAAGAGTGCACACCAGCATACATAGAAAGAATCAGAGAAAGGTATCAAGGAAAATGGTTCAACACTTCAGGTCCTCCTCCAAATCCAGCTGTTCATTTGATTTCAGCTATGAGACAGATTCTTAGGAGGAGTTTGGTTAGGTCCACACCAAATAGTCCAGTTAATAAGAGTAGTAGAGAAATTCATGGCTCTGGACTTGCTAGGTCTGAAAGCTGCTTCTCTACTCTATCCGGGTCATGTCAGGGTCGAGGACCGGAGATGCCTTCATCAGAAATAGAAGAATATGCCACAAAGGGAATATACTGTATTTGGTTGGTTGAAAATGCAAAAGTTGAAAAGAAATAA 525 0.3829 MLTCLIIDFFFFIIGWLKMSATMISDAMMITAPETQSTTSSNLVAQNEVEFAVCECCGLTEECTPAYIERIRERYQGKWFNTSGPPPNPAVHLISAMRQILRRSLVRSTPNSPVNKSSREIHGSGLARSESCFSTLSGSCQGRGPEMPSSEIEEYATKGIYCIWLVENAKVEKK* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3902 174 PANTHER DUF1677 FAMILY PROTEIN (DUF1677) 82 136 - -
Psa4g3902 174 PANTHER DUF1677 FAMILY PROTEIN (DUF1677) 28 79 - -
Psa4g3902 174 Pfam Protein of unknown function (DUF1677) 49 80 IPR012876 -
Psa4g3902 174 PANTHER OS01G0745000 PROTEIN 28 79 IPR012876 -
Psa4g3902 174 PANTHER OS01G0745000 PROTEIN 82 136 IPR012876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3902 Psa-Chr4 326118177 326119607 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3902 - - lja:Lj3g3v2576730.1 176.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g3902 4 326118177 326119607 Psa4g3902 4 326118177 326119607 ECH
Psa4g3902 4 326118177 326119607 Psa5g0816 5 65277196 65278569 ECH
Psa4g3902 4 326118177 326119607 Psa6g0552 6 18280278 18281824 ECH