Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g6901 ATGAAGAAACAATGCTGCAAAGAATCTGAAACACATCAAAACCAACAACTATCATTGGAATATTGTTGCTGGTTTGAAGATGCATGCATCCTTGACATGGATTACTTTGTTAAAACTCTTTCAAACATCAAACAGAAAGGCGTTCGCGCCGATTTAATCGGCTCAATCATCACTCACTATGCTTCCAAATGGCTCCCTGATCTCGTAACTTCAAATGCAAATGCAAATGCGAATTCAAATGCAAATGCTAATGCTAGTTCACCCGAAAGTGCGACAACATCATGGATGAAGAAAAAATTCTTTGTTGAAACCTTAATCAGTGTTCTTCCACCAGACAAAGATTCAATCCCATGCAACTTCCTTCTTCGTTTACTCAGAACGGCGAACATGGTTTCTGTCGAGGCTACTTATCGAGCCGAGCTTGAGAATCGAGTTTCATGGCAGTTAGATCAAGCTTCATTGAAGGAACTCATGATACCTTCTTTTAGTCATACATGTGGAACCCTTTTGGATGTTGAGCTTGTTATTAGGTTGGTGAAGAGGTTCTTGAATTTGGATCATGATGGTTCGAAAACCGGTGCTGCTTCTTTGGTTAAGGTTGCTAAGTTGGTTGATTGTTACCTTGCTGAGGTTGGTTTGGATTCTAATCTGAGTTTGTCTCAATTTGTTTCACTTGCTGCTGCTCTTCCTAGTCATGCAAGAGCAACTGATGATGGCTTGTATAGAGCCATTGATACTTATCTTAAAGCACATCCAAGCGTGTCGAAGCAAGAAAGGAAGGGACTGTGTAGATTGATTGATAGCAGGAAACTTACACCAGAAGCTTCGCTTCATGCGGCACAAAACGAACGGTTACCTGTGAGAGCTGTTATTCAGGTACTTTTCACCGAACAAACGAAACTCAACCGCCACATTGATTGGAGTGCTTCTTTCAGTAGCTTGAGGAGTCCGAGTGGATATCACAGTGTGTTGGAGACACCAGAACGGTGTCTTTCGAAGCGCGAAATGAATGCGCAGCAAATGGAGATAAAGAAATTGAAGGAAGATGTTTACAGGCTGCAAAGTCAGTGCAATGCTATGCAAGCACAGATGGATAAGATGGCTGAGAAGAAGAAAGGTTTCTTCAAATGGAAGAAACTTGGTTTTAGAAAAAGCAACGGAGAGACAGGGAACGTTGAACATGAAACTCAGACGGAATTTGGATTCGGAACGCAAACACCTATGGACATGAAAACTAGTAATGTCCTCAAAGGTAGGACTCCTCAAAACTGGAGAAAATCACTTTCGTGA 1290 0.4163 MKKQCCKESETHQNQQLSLEYCCWFEDACILDMDYFVKTLSNIKQKGVRADLIGSIITHYASKWLPDLVTSNANANANSNANANASSPESATTSWMKKKFFVETLISVLPPDKDSIPCNFLLRLLRTANMVSVEATYRAELENRVSWQLDQASLKELMIPSFSHTCGTLLDVELVIRLVKRFLNLDHDGSKTGAASLVKVAKLVDCYLAEVGLDSNLSLSQFVSLAAALPSHARATDDGLYRAIDTYLKAHPSVSKQERKGLCRLIDSRKLTPEASLHAAQNERLPVRAVIQVLFTEQTKLNRHIDWSASFSSLRSPSGYHSVLETPERCLSKREMNAQQMEIKKLKEDVYRLQSQCNAMQAQMDKMAEKKKGFFKWKKLGFRKSNGETGNVEHETQTEFGFGTQTPMDMKTSNVLKGRTPQNWRKSLS* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g6901 429 Coils Coil 336 363 - -
Psa5g6901 429 Pfam NPH3 family 23 276 IPR027356 -
Psa5g6901 429 ProSiteProfiles NPH3 domain profile. 22 300 IPR027356 -
Psa5g6901 429 PANTHER OS12G0117600 PROTEIN 11 429 IPR043454 -
Psa5g6901 429 PANTHER PHOTOTROPIC-RESPONSIVE NPH3 FAMILY PROTEIN 11 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g6901 Psa-Chr5 568431753 568433575 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g6901 24 366 EF-hand Containing Proteins AT3G44820 32.000 3.53e-52 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g6901 - - gmx:100777820 608.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g6901 5 568431753 568433575 Psa5g6901 5 568431753 568433575 ECH
Psa5g6901 5 568431753 568433575 Psa7g5826 7 484258023 484259765 PCT