Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g6798 ATGGACAGAAACAATCCCCGCAGACAAGTTGCTGCAATGAAACAGTCACTGTTTGATCAGGGACTTCTTGATGAACAATTTATCCAACTTGAAGAATTGCAAGATGATGCTAATCCTAACTTTGTTGAGGAAATTGGAGAGAATCCATTGGATTTCAACAAGTTGGACACAATCATGCATCAGTTTAAAGGAAGCAGCTCAAGCATTGGGGCGAAAAAGGTGAAAGCAGAATCGAGTCAAATTAGAGAATATTGCAGAACAGGAAATGCAGAAGGGTGTAGGAAAAGCTATCAACAAATGAAGAAAGAATATGTAGCATTGAGAAAGAAACTTGAAAATTACTTTCAACTAGCTAGGCAAGCTGGACCATTGGAGAGAGCATGTCGCCCAAAGTAA 396 0.3939 MDRNNPRRQVAAMKQSLFDQGLLDEQFIQLEELQDDANPNFVEEIGENPLDFNKLDTIMHQFKGSSSSIGAKKVKAESSQIREYCRTGNAEGCRKSYQQMKKEYVALRKKLENYFQLARQAGPLERACRPK* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g6798 131 Gene3D HPT domain 1 46 IPR036641 GO:0000160
Psa5g6798 131 PANTHER - 47 127 IPR045871 GO:0000160|GO:0009927|GO:0043424
Psa5g6798 131 PANTHER - 3 45 IPR045871 GO:0000160|GO:0009927|GO:0043424
Psa5g6798 131 Gene3D HPT domain 47 126 IPR036641 GO:0000160
Psa5g6798 131 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 6 120 IPR036641 GO:0000160
Psa5g6798 131 PANTHER HISTIDINE-CONTAINING PHOSPHOTRANSFER PROTEIN 4 3 45 - -
Psa5g6798 131 PANTHER HISTIDINE-CONTAINING PHOSPHOTRANSFER PROTEIN 4 47 127 - -
Psa5g6798 131 Coils Coil 97 117 - -
Psa5g6798 131 Pfam Hpt domain 28 108 IPR008207 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g6798 Psa-Chr5 562790143 562790923 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g6798 K14490 - gmx:100526849 214.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g5080 4 440675582 440676849 Psa5g6798 5 562790143 562790923 ECH
Psa5g6798 5 562790143 562790923 Psa5g6798 5 562790143 562790923 ECH
Psa5g6798 5 562790143 562790923 Psa4g5080 4 440675582 440676849 PCT