Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g5080 ATGTCTCAGGGATTGCTTGATGAACAATTTATCCAACTAGAAGAACTACAAGACGATGCTAATCCTAACTTTGTCGAAGAAATTGTCACTCTTTACTACCATGATTCATTACGCCTTATTTCAAGCATAGAGCAAGCTTTAAAAGAGAGGAACATGTTGGATTTCAACAAATTGGACACCCTGATGCATCAGTTCACAGGAAGTAGTTCAAGCATTGGAGCCAAAAAGGTGAAAGTAGAGTGCAATCTGTTTAGGGAATATTGTAGTGCAGGAAATATTGAAGGATGCATGAAGAGTTTTCATCAATTAAAAAAAGAATATGCTTCACTAAAAAAGAAACTTGAAGCTTATTTTCAGTTGGCTAGGCAAGTTGGGCTCTAG 381 0.3675 MSQGLLDEQFIQLEELQDDANPNFVEEIVTLYYHDSLRLISSIEQALKERNMLDFNKLDTLMHQFTGSSSSIGAKKVKVECNLFREYCSAGNIEGCMKSFHQLKKEYASLKKKLEAYFQLARQVGL* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g5080 126 Pfam Hpt domain 27 111 IPR008207 GO:0000160
Psa4g5080 126 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 3 124 IPR036641 GO:0000160
Psa4g5080 126 Coils Coil 100 120 - -
Psa4g5080 126 ProSiteProfiles Histidine-containing phosphotransfer (HPt) domain profile. 21 117 IPR008207 GO:0000160
Psa4g5080 126 Gene3D HPT domain 1 125 IPR036641 GO:0000160
Psa4g5080 126 PANTHER - 2 125 IPR045871 GO:0000160|GO:0009927|GO:0043424
Psa4g5080 126 PANTHER HISTIDINE-CONTAINING PHOSPHOTRANSFER PROTEIN 4 2 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g5080 Psa-Chr4 440675582 440676849 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g5080 K14490 - gmx:100798055 219.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g5080 4 440675582 440676849 Psa5g6798 5 562790143 562790923 ECH
Psa4g5080 4 440675582 440676849 Psa4g5080 4 440675582 440676849 ECH
Psa5g6798 5 562790143 562790923 Psa4g5080 4 440675582 440676849 PCT