Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g6784 ATGATGATAAAGAAGGACAAGGGTGTGAAGCCTATTTTGGTGAACATTGGTTTGGCTTTGGGGTTTTCTTTTGCTGGATTTCTTTGCTCACGCCTCAGAATCAATCAAGGTCATGAAATTGATGCAACGTGCACCGACGAGTCGAGGAGTGGGAATTCTCCTATCGATCTTCTCAGTAACACTAAAAATGGGGATAGAGATGAGTTTCTCTTACCTGAGTTTGATGAGCTCGTTAAGGAGGTAGAATTCGAAGTAGAGTCGCGGAAGTTAGAAGTAAGAACTTCTAGACCATATGCAGGTTCTGATAAGGATGACTATGAAAACGAGATACATCGACTCAAGAACATGGTTAGAATGCTTCAAGACAAGGAGCAAAACCTCGAGGTTCAGCTACTTGAGTACTATGGTCTTAGAGAGCAAGAAACGGTTGTGATGGAGCTTGAAAATAGATTGAAGATAAGTAATATGGAGGTCAACATGTTCAATTTGAAGGCTAAAAAGTTACAGTCTGAGAATCGAAGATTAAAGGAACAGGTTTCCGATCATGCAAACGTGCTAGCTGAGCTTGACGCAGCAAGAGCAAAAATCGAGCTGCTCAATAAGGAAATTAGGCGTGAGGCTGAACAGAATAAAGAGCGGATCGTTAGTCTTCAACAAAGAGTAGCCAAGTTGCAAGACCAGGAATGCAAAGATGCTGCTTCTGATCAGGACATCAAAATTAAGCTGCAAAAGTTAGAGGCGCTTGAGTCTGAAGTAGAGGAGTTGAGGAAATCTAATTCGAGATTGCAGATAGAGAATTCTGACTTAACTAGAAGATTCGATTCCACGCAGATCCATGCTAATGATGCGAATCAAGAAAGTGAGCGTCTTAGAAAAGAAAACGAGGACTTGATGAAGCAAATTGAGCAACTACAATCTGATCGACGTTCAGATATTGAAGAATTAGTGTACATGCGGTGGGTAAATGCTCGTTTACGACACGAGCTGCAGAATCATCAGCCTCTACACAATAAAATGGTTGCAAAGGACTTGAGTAAAAGCTTAAACCCTACCTCTGAGATTGAAGCCGAGAAACTAAGACTTGAATATGCTGATACTAATGGACTAGGGAGTACTATGGATTTTGATTTAAATCAACGGTCCTCCTCGCAATCTTCTTCTATTACCGACTCCGGAGAGTATGATCATTTTTCTGCCAGAACTAACGCCACGACTCAGAACAAGTTTTTTAGCAAGCTTAGAAGATTGATATTAGGAAAGGATAGACATCGTCGTCATAGTCAGGTTTCATCTAAATATCAAGAAGATATCAATTCTCAACCACGGAATACATCAACCGACACTGACGGTAGAACTTCCTTTGATAGGAGAAATTCAAGTTTTGACGGTAGAACTTCCTTTGATAGGAGATATTCAAGTTTTGACGGAGAAGGTTCGTTCTCCGACTTCTTAGGCTTAGAGAAATCTGATTTTGAGAAATATGCAGAAGCTCTAGAAGATTCTAGTGCGAATGATAAACATCAAAGACGAGGAAGATCAACATCATTTAGTTAG 1554 0.4041 MMIKKDKGVKPILVNIGLALGFSFAGFLCSRLRINQGHEIDATCTDESRSGNSPIDLLSNTKNGDRDEFLLPEFDELVKEVEFEVESRKLEVRTSRPYAGSDKDDYENEIHRLKNMVRMLQDKEQNLEVQLLEYYGLREQETVVMELENRLKISNMEVNMFNLKAKKLQSENRRLKEQVSDHANVLAELDAARAKIELLNKEIRREAEQNKERIVSLQQRVAKLQDQECKDAASDQDIKIKLQKLEALESEVEELRKSNSRLQIENSDLTRRFDSTQIHANDANQESERLRKENEDLMKQIEQLQSDRRSDIEELVYMRWVNARLRHELQNHQPLHNKMVAKDLSKSLNPTSEIEAEKLRLEYADTNGLGSTMDFDLNQRSSSQSSSITDSGEYDHFSARTNATTQNKFFSKLRRLILGKDRHRRHSQVSSKYQEDINSQPRNTSTDTDGRTSFDRRNSSFDGRTSFDRRYSSFDGEGSFSDFLGLEKSDFEKYAEALEDSSANDKHQRRGRSTSFS* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g6784 517 Coils Coil 137 227 - -
Psa5g6784 517 MobiDBLite consensus disorder prediction 432 448 - -
Psa5g6784 517 MobiDBLite consensus disorder prediction 497 517 - -
Psa5g6784 517 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 42 510 IPR040265 -
Psa5g6784 517 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 2 39 IPR040265 -
Psa5g6784 517 Coils Coil 238 272 - -
Psa5g6784 517 Coils Coil 280 314 - -
Psa5g6784 517 Coils Coil 103 133 - -
Psa5g6784 517 MobiDBLite consensus disorder prediction 374 393 - -
Psa5g6784 517 MobiDBLite consensus disorder prediction 421 459 - -
Psa5g6784 517 PANTHER ACTIN BINDING PROTEIN FAMILY 2 39 - -
Psa5g6784 517 PANTHER ACTIN BINDING PROTEIN FAMILY 42 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g6784 Psa-Chr5 562171272 562173594 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g6784 - - gmx:100819899 527.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g6784 5 562171272 562173594 Psa5g6784 5 562171272 562173594 ECH
Psa5g6784 5 562171272 562173594 Psa4g4535 4 404790073 404792915 PCT