Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4535 ATGATGGAAGATGATGCTAATGAAAAGATTTTGATTGCGGTTTCGGAGTATGATAATGGAGAAAAAACTAGACGGATCAAGTCTTCCCCCAAAGACCACCACCCTTCAGGTCATAGGAGTGAAGTTAGTTTAGGAGGTATTAGAGCATCGTCGAGTTCTTGCAATATTCATTCAGAAGGAAGCAATTTCGATGCAGAAGAAAAATGCATCAACAAGGTTGTATGTAGAAGTTCTTCAACTGGTGTCTCTCCAAGAACTAAACATAATGGAGAGAAAGACGAGTTTCTCGTCCCCGAACTCAACGATTCTTCTGCGTCGGCACATTCAAGTAACGAGAAAGATGCTTATGAGCAAGAAATCAGAAAACTGAGGAACAATATCATAATGCTTCAAGAGAGGGAGAGAACTCTCGAGGTTCAACTTCTTGATTACTGCGGTCTAAGGGAGCAAGAAACAGCAGTAATGGAGCTTCAAAACCGATTGAAATTAAGTAACATGGAGTCGAAAATGTTTAATCTAAAAGTCGAGACGTTACAGTCCGAGAATAAGAGATTAGAGGTACAGGTTGCAGGTCATGCGAAACTGCTTGCTGAACTCGAGGCTTCAAAAACAAAACTGAAATGTTTGAAGAAGAAAATTAGGAATGAAGCTGAACAGAATAAGGAGCATATCGTAAATCTTAAACAAAAAGTTACAAAGTTGCAGGAGCTTGAATCCAAAGCTGTTGCGAATGATCAAGAAATTCAAATGAAGCTGGAAAAGCTAAATGGTCTTGAGGTTGAGGCAGAAAAGTGGAGGAAATCTTGTTTGAGATTGCAGAAGGAAAATTCTGACTTAGCTCAAAGATTGGAGTCTACTCAAATCCTTGCGAATTCTGTTCTTGAAGATCCAGAAGCAGATGCTCTAAGGGAAGAAAGCGACCGTCTGAGGCGAGAGAACGAGGGATTAACGAAAGAAGTTGTGCAACTAAAAGCTGATAGATGCACCGATGTTGAAGAATTAGTTTATTTAAGGTGGCTAAATGCTTGCTTAAGACATGAATTAAGAAACTATCAACCTCCACCTGGTAAAACAGTTGCAAGGGACTTAAGTAAAAGCTTAAGTCCAGCTTCTGAGAAGAAAGCTAAACAGCTTATACTCGAATATGCAAATGCCGAAGGAAGAGTTAGCATTTCTGATTTGGATTCTGATCAATGGTCCTCTTCACAAGCTTCTTACAGTGAGTATGAAGAGTTTTCTTCTCACGATAATTCATTCAATCCACGAGTCAGCAACGCCACAAACAAGTCGAAGATCTTTGGAAAACTTATGAAGCTAATGAGAGGAAAGGATAGTAGCAGCAATCTCAGTAGTAGAAGTACGTCTTTAGAAAAATCTAGATCGTTAGGATGTGGCCTTGATATTGGAGCTGATGGTCTTAAGAGCGAGTACGAATCTCTTATCGGGACGTCTCGAAATTCTATGGATTTAGAACAAACATTGAGTTTGAAGGAAGAGACTAGGAGAAATTCATCTGTTGAAAGATCAAAGAGTTTCTATCCAAGGAAAAGCGGTTCGGGAGATTTGAAAATTACCAGTGACTCTTTCTCAGAATCTTATAGCACAGTGAGATCTAATTTGATCAAATATGCTGAAGCTTTAAAAGATTCTAGTACTAGCGAAACTCCGAAACATGAAATATGTAGAAGATCAGCATCATATAGTTCATTTTAA 1713 0.3888 MMEDDANEKILIAVSEYDNGEKTRRIKSSPKDHHPSGHRSEVSLGGIRASSSSCNIHSEGSNFDAEEKCINKVVCRSSSTGVSPRTKHNGEKDEFLVPELNDSSASAHSSNEKDAYEQEIRKLRNNIIMLQERERTLEVQLLDYCGLREQETAVMELQNRLKLSNMESKMFNLKVETLQSENKRLEVQVAGHAKLLAELEASKTKLKCLKKKIRNEAEQNKEHIVNLKQKVTKLQELESKAVANDQEIQMKLEKLNGLEVEAEKWRKSCLRLQKENSDLAQRLESTQILANSVLEDPEADALREESDRLRRENEGLTKEVVQLKADRCTDVEELVYLRWLNACLRHELRNYQPPPGKTVARDLSKSLSPASEKKAKQLILEYANAEGRVSISDLDSDQWSSSQASYSEYEEFSSHDNSFNPRVSNATNKSKIFGKLMKLMRGKDSSSNLSSRSTSLEKSRSLGCGLDIGADGLKSEYESLIGTSRNSMDLEQTLSLKEETRRNSSVERSKSFYPRKSGSGDLKITSDSFSESYSTVRSNLIKYAEALKDSSTSETPKHEICRRSASYSSF* 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4535 570 Coils Coil 106 140 - -
Psa4g4535 570 MobiDBLite consensus disorder prediction 18 39 - -
Psa4g4535 570 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 22 570 IPR040265 -
Psa4g4535 570 MobiDBLite consensus disorder prediction 80 113 - -
Psa4g4535 570 Coils Coil 255 275 - -
Psa4g4535 570 MobiDBLite consensus disorder prediction 497 519 - -
Psa4g4535 570 MobiDBLite consensus disorder prediction 15 46 - -
Psa4g4535 570 Coils Coil 147 240 - -
Psa4g4535 570 Coils Coil 299 326 - -
Psa4g4535 570 PANTHER FAMILY PROTEIN, PUTATIVE-RELATED 22 570 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4535 Psa-Chr4 404790073 404792915 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4535 - - gmx:100781632 572.392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g4535 4 404790073 404792915 Psa4g4535 4 404790073 404792915 ECH
Psa5g6784 5 562171272 562173594 Psa4g4535 4 404790073 404792915 PCT