Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g6716 ATGGCTATCTCTTCAATTTTCTTGCTTTCTCTTTTCTCTCTCATTTATGTTATTCCCATTGAAGCTACTCACCATGTTTACCAAACTCTTGAAACTTTATCTTCTCATCATTCCTCAAAATCAAATCATCAACCTTATAGAACTGCATATCACTTTCAACCTCTCAAGAATTGGATAAATGGACCAATGAGATATGGAGGATTTTATCATCTATTTTACCAATATAACCCTAAAGGTGCTGTATGGGGAAATATTGTGTGGGCCCATTCAGTATCTAAAGATCTTGTGAATTGGACACCGTTAGATCATGCAATCCACCCTTCTCAACCGTCCGATATAAAAGGTTGCTGGTCAGGTTCAGCAACAATACTCCCAGGTGGAAAACCAGCAATTTTGTATACAGGAATTGATCCAAATAATCACCAAGTTCAAAACATAGCCATACCTAAAAACATGTCTGACCCATTACTTAGAGAATGGAAAAAATCACCAAAAAACCCATTAATGGAACCTACTATTGCTAATAAAATTAATTCAAGTTCATTTAGAGACCCTACCACATCTTGGCTAGGAAAAGATGGGTTTTGGAGGGTATTAATTGGTAGCAAAATAGATACAAAGGGAATGGCAATTTTGTACAAAAGTAAAAATTTTGTTGATTGGGTTGAAGCAAAACATCCTTTGCATTCAGCTGAAGGAACAGGAATGTGGGAGTGTCCTGATTTTTATCCAGTTTTGGATAAGAATTTATTAAGAACTGGAGTTGATACTTCAAGGAATGGTGACGATGATGTTAGACATGTTCTTAAGGTTAGTTTGGATGATACAAAACATGATCATTATTTGATTGGGAGTTATGATGTTGTTAAGGATGTTTTTGTTCCGGAAAATGGATTTGAGGATAACGGATTTGTTTTGAGATATGATTATGGGAAATATTATGCGTCTAAAACATTTTTCGATGATGGGAAGAATAGAAGGATTTTGTTGGGTTGGGTTAACGAATCTTCAAGTGTTGCTGATGATGTCAAGAAAGGTTGGTCTGGGATTCATACTATTCCAAGAGAAATTTGGCTTCATGAATCTGGGAAACAATTGGTACAATGGCCGGTGAAGGAAATTGAAAATCTACGTATGAATCCGGTAAATTGGCCAACCAAGGTGATTAAAGGAGGTGAAAGGATTTCAATTACTGGTGTTGATTCCGTACAGGCTGATGTTGAAATTTCATTTGAAATAAGTGATTTAGGAAAGGTGGAATCATTGAGGAAATGGATTGATCCTCAACTTCTGTGTAGTCAAAAGGGTGCAGGTGTAAAAGGTGGCGTTGGGCCATTTGGTTTGTTAGTATTTGCTTCTCAAGGGTTGAAAGAATATACAGCAGTGTTTTTTAGAATATTCAAATACCAAGATAAGAATTTGGTTCTCATGTGCAGTGACCAAAGCAGGTCATCTTTGAATAAAGATAATGATATGACTAGTTATGGAACTTTTGTGGATGTTGACCCTCTTCATGAAAAGTTGTCACTAAGAACTTTGATTGATCATTCGGTGGTGGAAAGTTTTGGGGGTGAAGGAAGGGCTTGCGTTACGGCCAGAGTTTATCCTACATTAGCAATTCATGATAAGGCTATGTTATATGCTTTTAATAATGGAACTTCTGCGGTCAAGATCACAAGTTTGAGTGCATGGAGTATGAAGAAAGCAAAGATCAACTGA 1719 0.3659 MAISSIFLLSLFSLIYVIPIEATHHVYQTLETLSSHHSSKSNHQPYRTAYHFQPLKNWINGPMRYGGFYHLFYQYNPKGAVWGNIVWAHSVSKDLVNWTPLDHAIHPSQPSDIKGCWSGSATILPGGKPAILYTGIDPNNHQVQNIAIPKNMSDPLLREWKKSPKNPLMEPTIANKINSSSFRDPTTSWLGKDGFWRVLIGSKIDTKGMAILYKSKNFVDWVEAKHPLHSAEGTGMWECPDFYPVLDKNLLRTGVDTSRNGDDDVRHVLKVSLDDTKHDHYLIGSYDVVKDVFVPENGFEDNGFVLRYDYGKYYASKTFFDDGKNRRILLGWVNESSSVADDVKKGWSGIHTIPREIWLHESGKQLVQWPVKEIENLRMNPVNWPTKVIKGGERISITGVDSVQADVEISFEISDLGKVESLRKWIDPQLLCSQKGAGVKGGVGPFGLLVFASQGLKEYTAVFFRIFKYQDKNLVLMCSDQSRSSLNKDNDMTSYGTFVDVDPLHEKLSLRTLIDHSVVESFGGEGRACVTARVYPTLAIHDKAMLYAFNNGTSAVKITSLSAWSMKKAKIN* 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g6716 572 SUPERFAMILY Arabinanase/levansucrase/invertase 43 371 IPR023296 -
Psa5g6716 572 SUPERFAMILY Concanavalin A-like lectins/glucanases 370 568 IPR013320 -
Psa5g6716 572 SMART glyco_32 51 526 IPR001362 GO:0004553|GO:0005975
Psa5g6716 572 Gene3D - 381 566 - -
Psa5g6716 572 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 2 572 - -
Psa5g6716 572 Pfam Glycosyl hydrolases family 32 C terminal 373 565 IPR013189 -
Psa5g6716 572 Gene3D Glycosyl hydrolase domain; family 43 56 380 IPR023296 -
Psa5g6716 572 PANTHER CELL-WALL INVERTASE 2 572 - -
Psa5g6716 572 Pfam Glycosyl hydrolases family 32 N-terminal domain 51 370 IPR013148 -
Psa5g6716 572 CDD GH32_Fruct1-like 57 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g6716 Psa-Chr5 558866921 558869422 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g6716 63 572 Glycoside Hydrolase AT3G13790 64.023 0.0 680
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g6716 K01193 - gmx:100776791 966.452
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g6716 5 558866921 558869422 Psa4g4338 4 382539807 382543392 PCT