Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4338 ATGACTCTACTCTCTACAATTTGGCTATTACCTCTCTTTACATTCATTTATCTTCATGGTGTTCTTCCCATTGAAGCTACTCACCATGTTTACAGAAACCTTGAGAGTTTATCTTCTGATGAATATTCCACAAATCAACCTTATAGAACTGGTTATCATTTCCAACCTCCAAAGAATTGGATAAATGATCCTAATGGTCCATTGATTTACAAAGGAGTTTATCATTTATTCTATCAATACAACCCTAAAGGTGCACAATGGGGAAATATAGTATGGGCCCATTCAATTTCAACTGATCTTGTTAACTGGACCCCACTAGACCCAGCCATCTTTCCATCTCAACCGTCCGATATAAATGGTTGTTGGTCAGGATCAACCACAATACTTCATGGTAACAAACCAGCAATTCTATACACAGGAATCAACAAACTCAACCACCAAGTTCAAAATTTAGCATACCCTAAAAATGTATCTGACCCTTTTCTAAGGGAATGGATCAAGTCACCAGAAAATCCAGTAATGGAACCAACTACTGAAAATAAAATTAACTCAAGTTCATTCAGAGATCCAACCACTGGTTGGTTAGGAAAAGATGGAAAATGGAGGGTTCTTATTGGGAGCAAAAGAAGAACCACAGGGATTGCAATTTTGTATAAGAGTAAAGATTTTGTTAATTGGGATAAATCTAAGCACCCTTTGCATTCAGCTAAGGGAACTGGAATGTGGGAGTGTCCTGATTTTTTTCCTGTGTTGAAAAATGGGATTAATGGTGTTGATACATCATTAAATGATAATTCTGTTAGACATGTTCTTAAGGTTAGTTTAGATGATCATAAACATGATTATTATCTTATTGGGAGTTATGAGGAAGAAAAAGACAGATTTGTCCCTGATAAAGGTTTTGAAGAAGTTGAAATTGAATATGTTTTTAGATATGATTATGGGAAATATTATGCTTCAAAAACTTTCTTTGATTATGAGAAGAATAGAAGGGTTTTGCTTGGTTGGGCTAATGAATCTTCAAGTGTTGATGATGATATCAAGAAAGGATGGTCTGGAATCCATGCAATTCCAAGGGCCATTTGGTTACATAAGTCAGGAAAACAGTTGGTACAGTGGCCAGTTGTAGAAATTGAGAAGCTGCGAGTAAATCATGTCAACTGGCCCACCAAACTTCTCAGGGGAGATGAACTTCTGCAAATTAATGGTGTCACAGCATCACAGGCTGATGTTGAAATTTCATTTGAAGTGAATGAGAATGACATTGGAGAAGCTGAAGTTTTGGAGAAATGGACAGATCCTCAAATTCTGTGTAGCCAAAAGGGTACATCAGTAAAAAGTGGTTTAGGACCTTTTGGTTTGTTAGCTTTTGCTTCAAAGGGGTTACAAGAGTTCACATCAGTGTTCTTTAGAATATTCAAATTCCAAAACAAAAACTTGGTCCTCTTTTGTAGTGACCAAAGCAGGTCTTCTTTGAATAAACATAATGATTTGACTAGTTATGGGACTTTTCTAGACGTGGATGTTCTTCATGAGAAGCTGTCATTGAGAACTTTGATTGATCACTCTGTGGTAGAGAGTTTTGGTGGAGAAGGAAAGGCATGCATTACAGCTAGAGTTTATCCCACATTGGCTATCAATGATAAAGCATTCATTTATGCTTTTAATAATGGAACTACTGATATCAAGATCACAAGTCTGAGTGCTTGGAGCATGAAGAAAGCACAGTTAAATGGAAAATTATAA 1746 0.3637 MTLLSTIWLLPLFTFIYLHGVLPIEATHHVYRNLESLSSDEYSTNQPYRTGYHFQPPKNWINDPNGPLIYKGVYHLFYQYNPKGAQWGNIVWAHSISTDLVNWTPLDPAIFPSQPSDINGCWSGSTTILHGNKPAILYTGINKLNHQVQNLAYPKNVSDPFLREWIKSPENPVMEPTTENKINSSSFRDPTTGWLGKDGKWRVLIGSKRRTTGIAILYKSKDFVNWDKSKHPLHSAKGTGMWECPDFFPVLKNGINGVDTSLNDNSVRHVLKVSLDDHKHDYYLIGSYEEEKDRFVPDKGFEEVEIEYVFRYDYGKYYASKTFFDYEKNRRVLLGWANESSSVDDDIKKGWSGIHAIPRAIWLHKSGKQLVQWPVVEIEKLRVNHVNWPTKLLRGDELLQINGVTASQADVEISFEVNENDIGEAEVLEKWTDPQILCSQKGTSVKSGLGPFGLLAFASKGLQEFTSVFFRIFKFQNKNLVLFCSDQSRSSLNKHNDLTSYGTFLDVDVLHEKLSLRTLIDHSVVESFGGEGKACITARVYPTLAINDKAFIYAFNNGTTDIKITSLSAWSMKKAQLNGKL* 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4338 581 CDD GH32_Fruct1-like 59 363 - -
Psa4g4338 581 ProSitePatterns Glycosyl hydrolases family 32 active site. 53 66 IPR018053 GO:0004553|GO:0005975
Psa4g4338 581 Pfam Glycosyl hydrolases family 32 C terminal 377 571 IPR013189 -
Psa4g4338 581 SUPERFAMILY Concanavalin A-like lectins/glucanases 374 574 IPR013320 -
Psa4g4338 581 SMART glyco_32 53 532 IPR001362 GO:0004553|GO:0005975
Psa4g4338 581 Gene3D Glycosyl hydrolase domain; family 43 57 384 IPR023296 -
Psa4g4338 581 Gene3D - 385 572 - -
Psa4g4338 581 Pfam Glycosyl hydrolases family 32 N-terminal domain 53 374 IPR013148 -
Psa4g4338 581 PANTHER CELL-WALL INVERTASE 4 578 - -
Psa4g4338 581 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 4 578 - -
Psa4g4338 581 SUPERFAMILY Arabinanase/levansucrase/invertase 43 375 IPR023296 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4338 Psa-Chr4 382539807 382543392 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g4338 68 578 Glycoside Hydrolase AT3G13790 62.813 0.0 665
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4338 K01193 - gmx:547681 923.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g4338 4 382539807 382543392 Psa4g4338 4 382539807 382543392 ECH
Psa5g6716 5 558866921 558869422 Psa4g4338 4 382539807 382543392 PCT