Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g4253 ATGGTGGCCGACAAGACCAAGAAGCTGAAGGTTTCTGAAAAGGGCGAGAACGCCGAGGAAATCGACGGAGAACTTGTCCTCTCCATTGAAAAGTTGCAGGAAATGCAAGATGAGCTTGAAAAGATCAATGAGGAGGCTAGTGATAAAGTTCTGGAAATTGAGCAGAAGTATAACGAGATAAGGAAGCCGCTGTATGATCAGCGCAATGATCTTATCAAGTCTATTCCTGATTTCTGGTTAACTGCTTTTTTGAGCCATCCTGCTCTTGGTGATCTTTTGAATGAGGAAGATCAGAAGATATTTAAGCATTTGAGTTCTCTTGAGGTTGAAGATCATAAAGATGTCAAATCGGGCTATTCAATCACCTTTAACTTTAATCCTAATCCCTATTTTGAGGATACAAAGCTTGTAAAGACTTTTACCTTCCTTGAAGAAGGAACAACAAAGGTTACTGCTACTCCCATTAAATGGAAAGAGGGCAAGGACATTCCAAATGGAGTTAGTCAAGAAAAGAAAGGCAACAAGCGAGCTGCTTCTGATGTCAGTTTCTTTACCTGGTTTAGTGATACCGAAGAGAAAGAAGATTTGGATGACCTCATTCATGATGAGGTTGCAGAATTAATCAAGGATGATTTATGGCCAAATCCACTTAATTATTTCAACAGCGAGGACCCTGACGAAGCGGAAGAGGATGATGATGAAGCTGGTGATGCGGGAAAGGATGATGACGACGACTCTGAAGATGATGATGACGATGACGACGATGATGATGAGGATGAATAA 783 0.4112 MVADKTKKLKVSEKGENAEEIDGELVLSIEKLQEMQDELEKINEEASDKVLEIEQKYNEIRKPLYDQRNDLIKSIPDFWLTAFLSHPALGDLLNEEDQKIFKHLSSLEVEDHKDVKSGYSITFNFNPNPYFEDTKLVKTFTFLEEGTTKVTATPIKWKEGKDIPNGVSQEKKGNKRAASDVSFFTWFSDTEEKEDLDDLIHDEVAELIKDDLWPNPLNYFNSEDPDEAEEDDDEAGDAGKDDDDDSEDDDDDDDDDDEDE* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g4253 260 Gene3D Nucleosome assembly protein 76 224 - -
Psa5g4253 260 PANTHER TESTIS-SPECIFIC Y-ENCODED PROTEIN 2 253 IPR002164 GO:0005634|GO:0006334
Psa5g4253 260 MobiDBLite consensus disorder prediction 223 260 - -
Psa5g4253 260 Coils Coil 25 59 - -
Psa5g4253 260 Pfam Nucleosome assembly protein (NAP) 73 221 IPR002164 GO:0005634|GO:0006334
Psa5g4253 260 Gene3D - 1 75 - -
Psa5g4253 260 SUPERFAMILY NAP-like 7 220 IPR037231 -
Psa5g4253 260 MobiDBLite consensus disorder prediction 212 260 - -
Psa5g4253 260 PANTHER NUCLEOSOME ASSEMBLY PROTEIN (NAP)-RELATED 2 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g4253 Psa-Chr5 346125402 346129534 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g4253 K11290 - gmx:100808081 400.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g4253 5 346125402 346129534 Psa4g1202 4 85434709 85442309 PCT