Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1202 ATGGTAGGAGACAGGTCAAAGAAGTTGAAACTTTCCGAGAATCCTGAAGATGTTGACGGCGAACTCATCCTCTCCATCGAGAAGTTGCAAGAGATCCAAGACAGCCTCGAGAAGATCAATGATGAAGCAAGTGATAAGGTCCTTGAAATTGAGCAGAAGTACAATGAGATAAGGAAACCGGTTTATGATAAGCGGAATGAGATCATCAAATCTATTCCTGACTTCTGGTTGAATGCTTTTTTGAGTCATCCTACCCTTAGCGAACTTCTTAACGAGGAAGATCAAAAGATATTCAAGTATTTGAGTTCTCTTGAGGTTGAAGATAATAAAGATGTAAAATCTGGATACACAATCACCCTTAATTTCAATTCAAATCCCTATTTTGAAGATTCAAAACTTTCAAAGACTTTTACCTTCCTTGAAGAAGGAACAACAAATATCACTGCTACCCCCATAAGATGGAAAGAGGGCAAGGGAATACCCAATGGTGTCGATCATGAGAAGAATGGGAACAAACGTGCTCCTGTTGATGTCAGTTTCCTTAGTTGGTTTTGTGACTGTGAGCAGAAAGATGATGATCTGCTTGACATTCATGATGAGGTTGCAGAATTAATCAAGGATGATTTATGGTCAAATCCACTTATTTATTTCAACAACGAGGAGCTTGATGAAGAGCATGGCGATGATGAAGCTGATGATGAGGAGAAAGATGAGGAGGAGGACTCTGAAGAAGATGACGATGAGGGTGACGACGAGGAAGGCAATTAG 768 0.401 MVGDRSKKLKLSENPEDVDGELILSIEKLQEIQDSLEKINDEASDKVLEIEQKYNEIRKPVYDKRNEIIKSIPDFWLNAFLSHPTLSELLNEEDQKIFKYLSSLEVEDNKDVKSGYTITLNFNSNPYFEDSKLSKTFTFLEEGTTNITATPIRWKEGKGIPNGVDHEKNGNKRAPVDVSFLSWFCDCEQKDDDLLDIHDEVAELIKDDLWSNPLIYFNNEELDEEHGDDEADDEEKDEEEDSEEDDDEGDDEEGN* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1202 255 Gene3D - 2 72 - -
Psa4g1202 255 Coils Coil 26 53 - -
Psa4g1202 255 Gene3D Nucleosome assembly protein 73 221 - -
Psa4g1202 255 SUPERFAMILY NAP-like 12 218 IPR037231 -
Psa4g1202 255 MobiDBLite consensus disorder prediction 218 255 - -
Psa4g1202 255 PANTHER TESTIS-SPECIFIC Y-ENCODED PROTEIN 2 248 IPR002164 GO:0005634|GO:0006334
Psa4g1202 255 MobiDBLite consensus disorder prediction 222 255 - -
Psa4g1202 255 Pfam Nucleosome assembly protein (NAP) 70 219 IPR002164 GO:0005634|GO:0006334
Psa4g1202 255 PANTHER NUCLEOSOME ASSEMBLY PROTEIN (NAP)-RELATED 2 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1202 Psa-Chr4 85434709 85442309 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1202 K11290 - gmx:100810307 370.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g1202 4 85434709 85442309 Psa4g1202 4 85434709 85442309 ECH
Psa5g4253 5 346125402 346129534 Psa4g1202 4 85434709 85442309 PCT